Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 MIR7-3-201ENST00000384898 110 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 PTP4A1P3-201ENST00000433661 420 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AL356276.2-201ENST00000435919 558 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 MED6P1-201ENST00000439659 713 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AL096829.2-201ENST00000446582 742 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 RPS6P2-201ENST00000454208 705 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 RNA5SP246-201ENST00000458909 119 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 RPL35AP15-201ENST00000468042 339 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AC111193.1-201ENST00000504097 155 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AC010374.2-201ENST00000512933 535 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 RN7SKP46-201ENST00000515942 234 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 HSPE1P5-201ENST00000561489 272 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AL109741.3-201ENST00000561748 592 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AL391001.1-201ENST00000602747 715 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 SUMO2P14-201ENST00000604488 293 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AL354984.3-201ENST00000604803 325 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AC017076.1-201ENST00000607613 578 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AC005156.1-201ENST00000613371 573 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AC244100.1-202ENST00000621554 382 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AC009269.6-201ENST00000621778 588 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 AC024023.1-201ENST00000624530 922 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 FP325313.1-201ENST00000638228 703 ntBASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.45□□□□□ -1.7
NECTIN4Q96NY8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 CASC19-261ENST00000641853 1638 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 Y_RNA.333-201ENST00000365274 102 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 MIR620-201ENST00000385232 95 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AL583835.1-201ENST00000399570 407 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AC097374.1-203ENST00000400783 485 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AL590290.1-201ENST00000405336 380 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 CYCSP10-201ENST00000417973 294 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 VN1R42P-201ENST00000424651 344 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 RNF2P1-201ENST00000442955 1010 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 RPL6P5-201ENST00000445678 828 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 DDX39BP2-208ENST00000453923 258 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 ATP5G1P3-201ENST00000463301 410 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 SETP6-201ENST00000479329 568 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AC020890.1-201ENST00000491837 504 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 MTCO3P27-201ENST00000514397 196 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 RN7SKP141-201ENST00000516167 338 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AC090181.2-201ENST00000602975 672 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AF129408.1-201ENST00000608767 431 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AC091905.2-201ENST00000623143 306 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AL133268.1-201ENST00000405676 1401 ntBASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NECTIN4Q96NY8 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.43□□□□□ -1.7
NECTIN4Q96NY8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
NECTIN4Q96NY8 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.43□□□□□ -1.7
NECTIN4Q96NY8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.43□□□□□ -1.7
NECTIN4Q96NY8 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms