Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC110794.1-201ENST00000505816 425 ntBASIC7.17□□□□□ -1.26
TRIM47Q96LD4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 RNU2-46P-201ENST00000517038 113 ntBASIC7.17□□□□□ -1.26
TRIM47Q96LD4 AP003467.2-201ENST00000520175 319 ntBASIC7.17□□□□□ -1.26
TRIM47Q96LD4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 SUB1P2-201ENST00000556401 297 ntBASIC7.17□□□□□ -1.26
TRIM47Q96LD4 AC091078.2-201ENST00000557145 559 ntBASIC7.17□□□□□ -1.26
TRIM47Q96LD4 ZNF322P1-201ENST00000568013 1209 ntBASIC7.17□□□□□ -1.26
TRIM47Q96LD4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 AC096772.1-201ENST00000609146 564 ntBASIC7.17□□□□□ -1.26
TRIM47Q96LD4 MIR6809-201ENST00000612189 116 ntBASIC7.17□□□□□ -1.26
TRIM47Q96LD4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 CASC19-221ENST00000641309 1382 ntBASIC7.17□□□□□ -1.26
TRIM47Q96LD4 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM47Q96LD4 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 OR9K1P-201ENST00000326513 941 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 RNU6-223P-201ENST00000362830 107 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 RNU6-774P-201ENST00000363238 107 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 RN7SKP6-201ENST00000364795 319 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 Y_RNA.447-201ENST00000384184 113 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 RNU6-31P-201ENST00000384388 108 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AC068050.1-201ENST00000394891 380 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AP003170.5-201ENST00000397185 335 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 SPA17P1-201ENST00000416656 452 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 ATP5JP1-201ENST00000431631 322 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 OR3D1P-201ENST00000438288 955 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 PCMTD1P1-201ENST00000455560 355 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 RNU6-261P-201ENST00000459506 102 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 GZMAP1-201ENST00000503054 631 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 MTCYBP40-201ENST00000509390 1135 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AC090958.1-201ENST00000511122 351 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 RNY4P37-201ENST00000516225 96 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AC233702.7-202ENST00000582941 211 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 Z83820.1-201ENST00000456978 1499 ntBASIC7.16□□□□□ -1.26
TRIM47Q96LD4 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM47Q96LD4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 OR4A15-201ENST00000314706 1035 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 RNU6-809P-201ENST00000384461 107 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 RPS3AP2-201ENST00000407190 754 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 RNU4-14P-201ENST00000410858 122 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AL451054.2-201ENST00000420896 202 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 BX284632.2-201ENST00000421091 399 ntBASIC7.15□□□□□ -1.26
TRIM47Q96LD4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.15□□□□□ -1.26
TRIM47Q96LD4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms