Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 NPM1P17-201ENST00000479221 602 ntBASIC5.07□□□□□ -1.6
USP47Q96K76 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USP47Q96K76 HMGB3P13-201ENST00000511263 607 ntBASIC5.07□□□□□ -1.6
USP47Q96K76 DEFB109D-201ENST00000529497 240 ntBASIC5.07□□□□□ -1.6
USP47Q96K76 AC022882.1-201ENST00000532142 501 ntBASIC5.07□□□□□ -1.6
USP47Q96K76 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.07□□□□□ -1.6
USP47Q96K76 ELOCP35-201ENST00000604289 336 ntBASIC5.07□□□□□ -1.6
USP47Q96K76 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
USP47Q96K76 AC073869.7-201ENST00000640874 297 ntBASIC5.07□□□□□ -1.6
USP47Q96K76 OR6C71P-202ENST00000641886 1107 ntBASIC5.07□□□□□ -1.6
USP47Q96K76 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.07□□□□□ -1.6
USP47Q96K76 NEAT1-202ENST00000501122 22743 ntBASIC5.07□□□□□ -1.6
USP47Q96K76 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USP47Q96K76 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.07□□□□□ -1.6
USP47Q96K76 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
USP47Q96K76 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.06□□□□□ -1.6
USP47Q96K76 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USP47Q96K76 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
USP47Q96K76 RNA5SP42-201ENST00000364278 115 ntBASIC5.06□□□□□ -1.6
USP47Q96K76 ZNF603P-201ENST00000405613 487 ntBASIC5.06□□□□□ -1.6
USP47Q96K76 AC096644.3-201ENST00000416788 338 ntBASIC5.06□□□□□ -1.6
USP47Q96K76 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.06□□□□□ -1.6
USP47Q96K76 AL590609.2-201ENST00000421430 368 ntBASIC5.06□□□□□ -1.6
USP47Q96K76 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.06□□□□□ -1.6
USP47Q96K76 RPL7P4-203ENST00000430239 730 ntBASIC5.06□□□□□ -1.6
USP47Q96K76 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.06□□□□□ -1.6
USP47Q96K76 RNU6-943P-201ENST00000516960 98 ntBASIC5.06□□□□□ -1.6
USP47Q96K76 AP006245.1-201ENST00000522549 120 ntBASIC5.06□□□□□ -1.6
USP47Q96K76 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.06□□□□□ -1.6
USP47Q96K76 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.06□□□□□ -1.6
USP47Q96K76 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.06□□□□□ -1.6
USP47Q96K76 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.06□□□□□ -1.6
USP47Q96K76 AL359715.5-201ENST00000623431 443 ntBASIC5.06□□□□□ -1.6
USP47Q96K76 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.06□□□□□ -1.6
USP47Q96K76 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP47Q96K76 AC005332.5-201ENST00000591222 2919 ntBASIC5.06□□□□□ -1.6
USP47Q96K76 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USP47Q96K76 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP47Q96K76 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
USP47Q96K76 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USP47Q96K76 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.06□□□□□ -1.6
USP47Q96K76 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
USP47Q96K76 AC073073.2-201ENST00000609827 2578 ntBASIC5.06□□□□□ -1.6
USP47Q96K76 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
USP47Q96K76 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USP47Q96K76 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
USP47Q96K76 AL445213.1-201ENST00000412589 747 ntBASIC5.05□□□□□ -1.6
USP47Q96K76 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.05□□□□□ -1.6
USP47Q96K76 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.05□□□□□ -1.6
USP47Q96K76 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.05□□□□□ -1.6
USP47Q96K76 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.05□□□□□ -1.6
USP47Q96K76 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
USP47Q96K76 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.05□□□□□ -1.6
USP47Q96K76 RNU6-579P-201ENST00000516879 102 ntBASIC5.05□□□□□ -1.6
USP47Q96K76 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.05□□□□□ -1.6
USP47Q96K76 RPL21P12-201ENST00000559810 515 ntBASIC5.05□□□□□ -1.6
USP47Q96K76 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.05□□□□□ -1.6
USP47Q96K76 AC011471.1-201ENST00000585766 187 ntBASIC5.05□□□□□ -1.6
USP47Q96K76 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.05□□□□□ -1.6
USP47Q96K76 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.05□□□□□ -1.6
USP47Q96K76 AC009950.2-201ENST00000636548 183 ntBASIC5.05□□□□□ -1.6
USP47Q96K76 PROS2P-201ENST00000474651 1951 ntBASIC5.05□□□□□ -1.6
USP47Q96K76 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
USP47Q96K76 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
USP47Q96K76 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP47Q96K76 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.04□□□□□ -1.6
USP47Q96K76 MIR218-2-201ENST00000385006 110 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 RN7SKP53-201ENST00000411337 315 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.04□□□□□ -1.6
USP47Q96K76 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.04□□□□□ -1.6
USP47Q96K76 ATP5JP1-201ENST00000431631 322 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.04□□□□□ -1.6
USP47Q96K76 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.04□□□□□ -1.6
USP47Q96K76 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.04□□□□□ -1.6
USP47Q96K76 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.04□□□□□ -1.6
USP47Q96K76 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.04□□□□□ -1.6
USP47Q96K76 AC005798.1-201ENST00000513715 387 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
USP47Q96K76 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.04□□□□□ -1.6
USP47Q96K76 HMGB1P50-201ENST00000605814 607 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.04□□□□□ -1.6
USP47Q96K76 AP001002.2-201ENST00000625137 386 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 AC093909.5-201ENST00000621839 1799 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.04□□□□□ -1.6
USP47Q96K76 CR381670.1-201ENST00000624291 1693 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
USP47Q96K76 AC011503.2-201ENST00000594230 1500 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
USP47Q96K76 AC007685.1-201ENST00000329806 452 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 OR52E6-202ENST00000379946 954 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 MIR634-201ENST00000385208 97 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP47Q96K76 RPS26P47-201ENST00000427219 348 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 TMX2P1-201ENST00000436507 708 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 HMGB1P16-201ENST00000447155 540 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 AL133244.1-201ENST00000456007 258 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 AC084357.1-201ENST00000473404 255 ntBASIC5.04□□□□□ -1.6
USP47Q96K76 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.04□□□□□ -1.6
USP47Q96K76 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms