Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 RPL10P18-201ENST00000519384 309 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 IGKV2-18-201ENST00000522607 343 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 HIGD1AP5-201ENST00000529959 259 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC068446.3-201ENST00000555285 382 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC090751.1-201ENST00000566966 267 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LRCH3Q96II8 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC006254.3-201ENST00000603353 884 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC015712.7-201ENST00000615211 635 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC018445.2-201ENST00000622987 260 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC073488.3-201ENST00000631611 778 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LRCH3Q96II8 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LRCH3Q96II8 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LRCH3Q96II8 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
LRCH3Q96II8 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LRCH3Q96II8 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 ANAPC1P1-201ENST00000426186 2145 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC093311.1-201ENST00000506586 2021 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 Y_RNA.26-201ENST00000362539 101 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 RNU6-82P-201ENST00000363970 107 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 RNU6-280P-201ENST00000364145 104 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 Y_RNA.518-201ENST00000384552 113 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 AL031679.1-201ENST00000400616 525 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 RN7SKP108-201ENST00000411367 328 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 POLHP1-201ENST00000411806 470 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 GAPDHP58-201ENST00000438477 1006 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 RPL21P133-201ENST00000443666 476 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 RPL23AP12-201ENST00000467573 473 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 GLRXP3-201ENST00000470810 321 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 RN7SL799P-201ENST00000475891 298 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 AC090686.1-201ENST00000481577 749 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 AC022215.1-201ENST00000481770 362 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 RPL23AP41-201ENST00000484754 458 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 AC093270.2-201ENST00000486157 792 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 RN7SL797P-201ENST00000486314 297 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 AC009901.1-201ENST00000506703 541 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 GAPDHP62-201ENST00000515313 990 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 RNU6-1212P-201ENST00000517023 104 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 IGKV2D-10-201ENST00000520194 281 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 AF279873.1-201ENST00000523393 313 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 AC135001.1-201ENST00000544546 283 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 SULT1C2P1-202ENST00000562418 459 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 AC018552.3-201ENST00000567416 561 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 USP9YP4-201ENST00000424401 1745 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 RAD17P2-201ENST00000451754 1977 ntBASIC7.26□□□□□ -1.25
LRCH3Q96II8 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
LRCH3Q96II8 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
LRCH3Q96II8 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
LRCH3Q96II8 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
LRCH3Q96II8 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
LRCH3Q96II8 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LRCH3Q96II8 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.25□□□□□ -1.25
LRCH3Q96II8 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms