Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL672167.1-206ENST00000356293 943 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 SNORA74A-201ENST00000364089 198 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 RNU6-1122P-201ENST00000384449 107 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 Y_RNA.553-201ENST00000384670 102 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 SNORA66-201ENST00000384792 133 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AC233981.1-201ENST00000423224 461 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 RHOT1P3-201ENST00000436571 331 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 RPL35AP21-201ENST00000437667 333 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AC073850.1-201ENST00000449243 255 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 KATNBL1P6-201ENST00000453433 915 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 RN7SL244P-201ENST00000493405 297 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 NDUFA5P12-201ENST00000503796 343 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 HMGB1P28-201ENST00000507778 552 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 SNORA48.10-201ENST00000516965 160 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AC027309.2-201ENST00000520566 192 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AC092851.1-201ENST00000535964 478 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 SERPINE4P-201ENST00000554978 281 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 MIR4691-201ENST00000583764 85 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AC093799.2-201ENST00000610062 578 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AC068792.1-201ENST00000621354 417 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AC009878.1-201ENST00000621819 340 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AP002799.1-201ENST00000623552 423 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 AC010329.2-201ENST00000595195 2737 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 OR5BR1P-201ENST00000524992 1330 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 MTND5P24-201ENST00000438892 1767 ntBASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CTHRC1Q96CG8 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 U3.4-201ENST00000363352 213 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 OR5H15-201ENST00000383696 930 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 CYCSP45-201ENST00000402289 315 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 TPMTP3-201ENST00000411928 735 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 FCF1P2-201ENST00000415284 583 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 LINC00993-201ENST00000420453 540 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC104333.2-201ENST00000422630 192 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 RPS3AP44-201ENST00000425466 790 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 TMX2P1-201ENST00000436507 708 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 PSMD10P3-201ENST00000437000 448 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 RAB11AP1-201ENST00000442978 646 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 CEACAMP7-201ENST00000444105 496 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 VN1R32P-201ENST00000452234 905 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AL691482.1-201ENST00000453255 87 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 HMGN3P1-201ENST00000453847 193 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 RNU6-956P-201ENST00000458868 103 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 RPL21P71-201ENST00000465598 459 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC104689.1-201ENST00000473356 768 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC025674.1-201ENST00000507074 324 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC004980.4-201ENST00000513375 203 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 RFPL4AP5-201ENST00000514977 504 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC105031.1-201ENST00000518550 476 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC060788.1-201ENST00000521318 469 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 OR7K1P-201ENST00000546439 926 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC092354.1-201ENST00000606057 376 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 MIR7844-201ENST00000616161 122 ntBASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms