Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC133104.1-201ENST00000429100 218 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 DYNLL1P7-201ENST00000429273 258 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 USP9YP9-201ENST00000429406 715 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC126120.1-201ENST00000431082 470 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 RSU1P2-202ENST00000437884 485 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 SNRPEP7-201ENST00000438350 220 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AL359955.2-201ENST00000445380 353 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 MTND4P19-201ENST00000446659 478 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 RPL23AP20-201ENST00000447965 421 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 RPL23AP12-201ENST00000467573 473 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 NIFKP7-201ENST00000503365 834 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC114967.1-201ENST00000504890 259 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC109481.1-201ENST00000509173 282 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 IGKV2-36-201ENST00000519999 223 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC010928.3-201ENST00000587712 541 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AL162413.1-201ENST00000603198 110 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AL359999.1-201ENST00000604513 294 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC007621.1-201ENST00000604544 437 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 Z95327.3-201ENST00000610385 572 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 MSL3P1-202ENST00000440028 1468 ntBASIC5.42□□□□□ -1.54
NUP43Q8NFH3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NUP43Q8NFH3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 CASC19-284ENST00000642142 1868 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC025125.1-201ENST00000624743 1922 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 RNY3P3-201ENST00000363816 102 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 U3.10-201ENST00000364459 214 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 RNU6-282P-201ENST00000365357 103 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 RNU2-28P-201ENST00000410457 189 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 RSU1P3-201ENST00000412878 835 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 RPS27AP6-201ENST00000427962 448 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 KCTD9P3-201ENST00000434597 1169 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 RPL17P49-201ENST00000443728 411 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 OR7E116P-201ENST00000448529 957 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 MEMO1P4-201ENST00000453590 386 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 MTND1P12-201ENST00000455231 147 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC093166.4-201ENST00000457867 318 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 UBA52P3-201ENST00000491303 382 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 Y_RNA.672-201ENST00000516289 104 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 RNA5SP438-201ENST00000516561 112 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 RNU6-1003P-201ENST00000517099 105 ntBASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.41□□□□□ -1.54
NUP43Q8NFH3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms