Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 HMGB3P16-201ENST00000508037 287 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 IGLVIV-65-201ENST00000517313 360 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 MIR4666A-201ENST00000580160 79 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AC008782.1-201ENST00000603386 430 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AP005137.2-201ENST00000609238 400 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AC018926.3-201ENST00000618841 406 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AL158163.2-201ENST00000619110 700 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AL359757.1-201ENST00000623176 255 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 CDRT1-208ENST00000630868 794 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 AL672167.1-205ENST00000641112 3080 ntBASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN4BQ8IWT1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.84□□□□□ -1.64
SCN4BQ8IWT1 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.84□□□□□ -1.64
SCN4BQ8IWT1 AC025031.4-201ENST00000621248 3271 ntBASIC4.84□□□□□ -1.64
SCN4BQ8IWT1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC135352.1-201ENST00000506173 1418 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 RPL32P3-201ENST00000359025 275 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 MIR16-1-201ENST00000385271 89 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC136624.1-201ENST00000400791 413 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 ERHP2-201ENST00000402323 299 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 RNU6-575P-201ENST00000411326 105 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 P2RY10P2-201ENST00000416730 913 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 ELOCP9-201ENST00000418624 239 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AL358176.3-201ENST00000420757 454 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 COX6CP17-201ENST00000421389 185 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 TMX2P1-201ENST00000436507 708 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 MTATP6P26-201ENST00000445926 662 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC007327.1-201ENST00000447461 264 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 RPS4XP12-201ENST00000461747 709 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 PRDX3P4-201ENST00000470828 747 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC010683.1-201ENST00000473673 378 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 GAPDHP39-201ENST00000481866 979 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC034244.1-201ENST00000507687 207 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC008562.1-201ENST00000521763 330 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC009712.1-201ENST00000564938 316 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC145350.1-201ENST00000567426 208 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 MIR4716-201ENST00000579628 84 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AP005262.1-201ENST00000582646 997 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 NF1P5-201ENST00000588287 448 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC138965.3-201ENST00000623875 498 ntBASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCN4BQ8IWT1 AC104118.1-201ENST00000607625 1589 ntBASIC4.82□□□□□ -1.64
SCN4BQ8IWT1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.82□□□□□ -1.64
SCN4BQ8IWT1 AC006971.1-201ENST00000407916 4486 ntBASIC4.82□□□□□ -1.64
SCN4BQ8IWT1 SGO1P1-201ENST00000603525 1447 ntBASIC4.82□□□□□ -1.64
SCN4BQ8IWT1 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCN4BQ8IWT1 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SCN4BQ8IWT1 snoZ40.1-201ENST00000364540 72 ntBASIC4.82□□□□□ -1.64
SCN4BQ8IWT1 SNORA51.12-201ENST00000384448 134 ntBASIC4.82□□□□□ -1.64
SCN4BQ8IWT1 RNU2-6P-201ENST00000411404 190 ntBASIC4.82□□□□□ -1.64
SCN4BQ8IWT1 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms