Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 RN7SL515P-201ENST00000463999 297 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 PPP1R11P1-201ENST00000486095 376 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC108078.1-201ENST00000508073 725 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 RNU6-714P-201ENST00000516963 103 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 MRPS16P1-201ENST00000523462 412 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC007494.1-201ENST00000562293 760 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AL353997.4-201ENST00000586196 166 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 DUXAP4-201ENST00000603046 613 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC245014.2-201ENST00000603689 287 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 IMMP1LP3-201ENST00000604197 224 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC246785.4-201ENST00000605374 287 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 RNU6-87P-201ENST00000607561 108 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC064836.2-201ENST00000609491 462 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC009237.17-201ENST00000618111 748 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC079776.5-201ENST00000641920 211 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 AC062029.1-202ENST00000606164 3651 ntBASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NPAS4Q8IUM7 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 MTND4P12-201ENST00000498999 1377 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AC092447.10-201ENST00000620607 1652 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 U3.7-201ENST00000363668 216 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 RNU6-853P-201ENST00000364306 107 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AL590609.2-201ENST00000421430 368 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 OR10T1P-201ENST00000424327 947 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 RPL12P34-201ENST00000424532 479 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 CFL1P1-202ENST00000432948 411 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AC012075.1-201ENST00000436549 580 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 RPL12P46-201ENST00000436610 195 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 RPS12P17-201ENST00000438591 377 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 SDCBPP1-201ENST00000440192 890 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AC023141.8-201ENST00000442554 208 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AC079922.1-201ENST00000443291 359 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 SBDSP1-204ENST00000453858 737 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 RPS20P32-201ENST00000456044 356 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 ACA64.4-201ENST00000459070 127 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 COPS8P2-201ENST00000473228 627 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AC009120.1-201ENST00000493458 473 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 HMGB1P29-201ENST00000505659 499 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AC010342.1-201ENST00000514047 877 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AL390334.1-201ENST00000556395 450 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 MIR4716-201ENST00000579628 84 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AC067852.5-201ENST00000589299 310 ntBASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.31□□□□□ -1.4
NPAS4Q8IUM7 CKS1BP3-201ENST00000600888 237 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms