Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 HIGD1AP4-201ENST00000430194 280 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 AL135938.1-201ENST00000443141 297 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 BX276092.4-201ENST00000452056 248 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 RPS3AP43-201ENST00000479743 781 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 AC109458.1-201ENST00000508858 316 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 AC021146.3-201ENST00000511911 260 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 SUMO2P20-201ENST00000520803 283 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 MIR7851-201ENST00000610611 160 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 AL137790.1-201ENST00000634283 177 ntBASIC2.82□□□□□ -1.96
VPS13CQ709C8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13CQ709C8 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
VPS13CQ709C8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13CQ709C8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS13CQ709C8 ASNSP3-201ENST00000451989 1306 ntBASIC2.81□□□□□ -1.96
VPS13CQ709C8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13CQ709C8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
VPS13CQ709C8 AL024507.1-201ENST00000412741 274 ntBASIC2.81□□□□□ -1.96
VPS13CQ709C8 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS13CQ709C8 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS13CQ709C8 NPM1P13-201ENST00000452663 865 ntBASIC2.81□□□□□ -1.96
VPS13CQ709C8 AC068724.1-201ENST00000487100 792 ntBASIC2.81□□□□□ -1.96
VPS13CQ709C8 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS13CQ709C8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC2.81□□□□□ -1.96
VPS13CQ709C8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS13CQ709C8 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13CQ709C8 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13CQ709C8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13CQ709C8 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13CQ709C8 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13CQ709C8 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
VPS13CQ709C8 AL035458.1-201ENST00000433096 585 ntBASIC2.81□□□□□ -1.96
VPS13CQ709C8 AL031584.1-201ENST00000447169 754 ntBASIC2.81□□□□□ -1.96
VPS13CQ709C8 AC104058.1-201ENST00000448028 297 ntBASIC2.81□□□□□ -1.96
VPS13CQ709C8 AP006245.1-201ENST00000522549 120 ntBASIC2.81□□□□□ -1.96
VPS13CQ709C8 AP000255.1-201ENST00000610276 676 ntBASIC2.81□□□□□ -1.96
VPS13CQ709C8 AC009159.1-201ENST00000618386 642 ntBASIC2.81□□□□□ -1.96
VPS13CQ709C8 OR5AC4P-202ENST00000642086 985 ntBASIC2.81□□□□□ -1.96
VPS13CQ709C8 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
VPS13CQ709C8 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS13CQ709C8 UBE3AP2-201ENST00000429033 2259 ntBASIC2.81□□□□□ -1.96
VPS13CQ709C8 SETP5-201ENST00000437270 562 ntBASIC2.81□□□□□ -1.96
VPS13CQ709C8 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS13CQ709C8 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
VPS13CQ709C8 AC010149.2-201ENST00000637608 315 ntBASIC2.81□□□□□ -1.96
VPS13CQ709C8 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC2.81□□□□□ -1.96
VPS13CQ709C8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13CQ709C8 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13CQ709C8 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 AC005005.4-201ENST00000623789 16698 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 AC062016.1-201ENST00000355719 319 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 SNORA5B-201ENST00000363786 132 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 BTF3P9-201ENST00000418784 283 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 AC112198.1-201ENST00000505369 1220 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 MIR2682-201ENST00000580305 110 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 AC091905.1-201ENST00000624400 311 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13CQ709C8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13CQ709C8 AC009963.1-201ENST00000417265 157 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 RPS4XP13-201ENST00000483219 789 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 NPM1P28-201ENST00000492269 840 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 RN7SKP132-201ENST00000516001 208 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 GTF3AP2-201ENST00000557014 266 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 AC090877.1-201ENST00000561418 344 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13CQ709C8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13CQ709C8 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13CQ709C8 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13CQ709C8 REREP1Y-201ENST00000422655 198 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 REREP2Y-201ENST00000439103 200 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 ARL4AP3-201ENST00000441452 574 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 AC109925.1-201ENST00000478069 331 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 AP000916.1-201ENST00000533869 835 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VPS13CQ709C8 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 CR383658.2-201ENST00000547576 1525 ntBASIC2.8□□□□□ -1.96
VPS13CQ709C8 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
VPS13CQ709C8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms