Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RIF1Q5UIP0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.49□□□□□ -1.85
RIF1Q5UIP0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RIF1Q5UIP0 ZNF962P-201ENST00000443465 3140 ntBASIC3.48□□□□□ -1.85
RIF1Q5UIP0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.48□□□□□ -1.85
RIF1Q5UIP0 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.48□□□□□ -1.85
RIF1Q5UIP0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.48□□□□□ -1.85
RIF1Q5UIP0 S100A11P1-201ENST00000477525 312 ntBASIC3.48□□□□□ -1.85
RIF1Q5UIP0 IGKV2-26-201ENST00000518305 343 ntBASIC3.48□□□□□ -1.85
RIF1Q5UIP0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.48□□□□□ -1.85
RIF1Q5UIP0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RIF1Q5UIP0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RIF1Q5UIP0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC3.48□□□□□ -1.85
RIF1Q5UIP0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.48□□□□□ -1.85
RIF1Q5UIP0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RIF1Q5UIP0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.48□□□□□ -1.85
RIF1Q5UIP0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RIF1Q5UIP0 PRELID3BP10-201ENST00000431957 584 ntBASIC3.48□□□□□ -1.85
RIF1Q5UIP0 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.48□□□□□ -1.85
RIF1Q5UIP0 AC140076.1-201ENST00000449897 361 ntBASIC3.48□□□□□ -1.85
RIF1Q5UIP0 AC239809.1-201ENST00000450470 217 ntBASIC3.48□□□□□ -1.85
RIF1Q5UIP0 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC3.48□□□□□ -1.85
RIF1Q5UIP0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RIF1Q5UIP0 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 AP000432.2-201ENST00000624164 2048 ntBASIC3.47□□□□□ -1.85
RIF1Q5UIP0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 AL139281.1-201ENST00000422120 335 ntBASIC3.47□□□□□ -1.85
RIF1Q5UIP0 OR6K4P-201ENST00000423179 955 ntBASIC3.47□□□□□ -1.85
RIF1Q5UIP0 AC005189.1-201ENST00000431286 310 ntBASIC3.47□□□□□ -1.85
RIF1Q5UIP0 AC006445.1-201ENST00000491925 405 ntBASIC3.47□□□□□ -1.85
RIF1Q5UIP0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 MIR7111-201ENST00000619751 72 ntBASIC3.47□□□□□ -1.85
RIF1Q5UIP0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 AC139713.2-215ENST00000641428 5037 ntBASIC3.47□□□□□ -1.85
RIF1Q5UIP0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 RAC1P2-201ENST00000511164 579 ntBASIC3.47□□□□□ -1.85
RIF1Q5UIP0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 VN1R78P-201ENST00000597393 564 ntBASIC3.47□□□□□ -1.85
RIF1Q5UIP0 AP000553.6-201ENST00000641242 118 ntBASIC3.47□□□□□ -1.85
RIF1Q5UIP0 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
RIF1Q5UIP0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.85
RIF1Q5UIP0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RIF1Q5UIP0 OSTCP5-201ENST00000425293 453 ntBASIC3.46□□□□□ -1.86
RIF1Q5UIP0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.46□□□□□ -1.86
RIF1Q5UIP0 AL356535.1-201ENST00000440335 398 ntBASIC3.46□□□□□ -1.86
RIF1Q5UIP0 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.46□□□□□ -1.86
RIF1Q5UIP0 AC026422.1-201ENST00000623961 452 ntBASIC3.46□□□□□ -1.86
RIF1Q5UIP0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
RIF1Q5UIP0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
RIF1Q5UIP0 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RIF1Q5UIP0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.46□□□□□ -1.86
RIF1Q5UIP0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
RIF1Q5UIP0 AL731532.2-201ENST00000623542 1953 ntBASIC3.46□□□□□ -1.86
RIF1Q5UIP0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.46□□□□□ -1.86
RIF1Q5UIP0 RPS4XP8-201ENST00000402039 771 ntBASIC3.46□□□□□ -1.86
RIF1Q5UIP0 LIPT1P1-201ENST00000415870 1186 ntBASIC3.46□□□□□ -1.86
RIF1Q5UIP0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.46□□□□□ -1.86
RIF1Q5UIP0 AL445433.1-201ENST00000457507 257 ntBASIC3.46□□□□□ -1.86
RIF1Q5UIP0 RPS4XP18-201ENST00000495480 763 ntBASIC3.46□□□□□ -1.86
RIF1Q5UIP0 OR5M7P-201ENST00000526140 972 ntBASIC3.46□□□□□ -1.86
RIF1Q5UIP0 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.46□□□□□ -1.86
RIF1Q5UIP0 AC069209.1-201ENST00000619282 651 ntBASIC3.46□□□□□ -1.86
RIF1Q5UIP0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.46□□□□□ -1.86
RIF1Q5UIP0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 AC093535.2-201ENST00000624769 2326 ntBASIC3.45□□□□□ -1.86
RIF1Q5UIP0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 FRG1CP-201ENST00000358464 769 ntBASIC3.45□□□□□ -1.86
RIF1Q5UIP0 AL035407.1-201ENST00000429211 571 ntBASIC3.45□□□□□ -1.86
RIF1Q5UIP0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 SNORA5.1-201ENST00000384275 131 ntBASIC3.45□□□□□ -1.86
RIF1Q5UIP0 RNA5SP247-201ENST00000411181 105 ntBASIC3.45□□□□□ -1.86
RIF1Q5UIP0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 RPL23AP89-201ENST00000439324 255 ntBASIC3.45□□□□□ -1.86
RIF1Q5UIP0 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 RNA5SP116-201ENST00000516132 98 ntBASIC3.45□□□□□ -1.86
RIF1Q5UIP0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
RIF1Q5UIP0 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms