Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC2.17□□□□□ -2.06
HSPG2P98160 AC006028.1-201ENST00000438379 402 ntBASIC2.17□□□□□ -2.06
HSPG2P98160 AC239809.1-201ENST00000450470 217 ntBASIC2.17□□□□□ -2.06
HSPG2P98160 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC2.17□□□□□ -2.06
HSPG2P98160 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.17□□□□□ -2.06
HSPG2P98160 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.17□□□□□ -2.06
HSPG2P98160 AC139713.2-210ENST00000641741 992 ntBASIC2.17□□□□□ -2.06
HSPG2P98160 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
HSPG2P98160 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HSPG2P98160 SMG1P4-204ENST00000523028 4131 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
HSPG2P98160 AC003685.2-201ENST00000422795 395 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.16□□□□□ -2.06
HSPG2P98160 RNA5SP356-201ENST00000515972 94 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HSPG2P98160 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.16□□□□□ -2.06
HSPG2P98160 AC008759.1-201ENST00000589783 983 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 VN1R78P-201ENST00000597393 564 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.16□□□□□ -2.06
HSPG2P98160 AC009159.1-201ENST00000618386 642 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HSPG2P98160 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
HSPG2P98160 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC2.16□□□□□ -2.06
HSPG2P98160 NCOA4P2-201ENST00000340589 1813 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HSPG2P98160 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC2.16□□□□□ -2.06
HSPG2P98160 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.16□□□□□ -2.06
HSPG2P98160 HMGB1P18-201ENST00000438801 619 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 RPL23AP89-201ENST00000439324 255 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 AC099563.1-201ENST00000456086 418 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 AC021146.3-201ENST00000511911 260 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC2.16□□□□□ -2.06
HSPG2P98160 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HSPG2P98160 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HSPG2P98160 AC245100.7-201ENST00000609678 442 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HSPG2P98160 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC2.16□□□□□ -2.06
HSPG2P98160 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HSPG2P98160 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.16□□□□□ -2.06
HSPG2P98160 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HSPG2P98160 OR1AA1P-201ENST00000419597 916 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HSPG2P98160 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HSPG2P98160 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC2.16□□□□□ -2.06
HSPG2P98160 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.16□□□□□ -2.06
HSPG2P98160 SNORD91B-202ENST00000608459 222 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 MIR7843-201ENST00000622274 79 ntBASIC2.16□□□□□ -2.06
HSPG2P98160 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HSPG2P98160 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HSPG2P98160 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC2.16□□□□□ -2.06
HSPG2P98160 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HSPG2P98160 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
HSPG2P98160 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
HSPG2P98160 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
HSPG2P98160 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.06
HSPG2P98160 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
HSPG2P98160 AL135938.1-201ENST00000443141 297 ntBASIC2.15□□□□□ -2.06
HSPG2P98160 PSMC1P13-201ENST00000458195 985 ntBASIC2.15□□□□□ -2.06
HSPG2P98160 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.15□□□□□ -2.06
HSPG2P98160 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC2.15□□□□□ -2.06
HSPG2P98160 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.15□□□□□ -2.06
HSPG2P98160 AC128687.2-201ENST00000609657 566 ntBASIC2.15□□□□□ -2.06
HSPG2P98160 AC069209.1-201ENST00000619282 651 ntBASIC2.15□□□□□ -2.06
HSPG2P98160 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
HSPG2P98160 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.06
HSPG2P98160 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
HSPG2P98160 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
HSPG2P98160 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC2.15□□□□□ -2.06
HSPG2P98160 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
HSPG2P98160 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
HSPG2P98160 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
HSPG2P98160 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HSPG2P98160 RIOK3P1-201ENST00000418778 1528 ntBASIC2.15□□□□□ -2.07
HSPG2P98160 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC2.15□□□□□ -2.07
HSPG2P98160 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HSPG2P98160 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HSPG2P98160 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.15□□□□□ -2.07
HSPG2P98160 SDCBPP2-201ENST00000424643 885 ntBASIC2.15□□□□□ -2.07
HSPG2P98160 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC2.15□□□□□ -2.07
HSPG2P98160 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC2.15□□□□□ -2.07
HSPG2P98160 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.15□□□□□ -2.07
HSPG2P98160 AL031584.1-201ENST00000447169 754 ntBASIC2.15□□□□□ -2.07
HSPG2P98160 AL513124.1-201ENST00000450410 614 ntBASIC2.15□□□□□ -2.07
HSPG2P98160 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.15□□□□□ -2.07
HSPG2P98160 AC005008.1-201ENST00000456151 612 ntBASIC2.15□□□□□ -2.07
HSPG2P98160 RPL31P50-201ENST00000471002 296 ntBASIC2.15□□□□□ -2.07
HSPG2P98160 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.15□□□□□ -2.07
HSPG2P98160 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.15□□□□□ -2.07
HSPG2P98160 MIR7851-201ENST00000610611 160 ntBASIC2.15□□□□□ -2.07
HSPG2P98160 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
HSPG2P98160 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
HSPG2P98160 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
HSPG2P98160 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
HSPG2P98160 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
HSPG2P98160 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HSPG2P98160 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.07
HSPG2P98160 U3.19-201ENST00000390893 196 ntBASIC2.15□□□□□ -2.07
HSPG2P98160 AL133477.1-201ENST00000457472 514 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms