Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RHBDL3P58872 AL136964.1-201ENST00000622038 2990 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.48□□□□□ -1.53
RHBDL3P58872 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDL3P58872 AL133412.1-201ENST00000380194 2992 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AL445487.1-201ENST00000415694 1580 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDL3P58872 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDL3P58872 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDL3P58872 ELL2P4-201ENST00000446870 1376 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDL3P58872 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDL3P58872 SNORA70E-201ENST00000384492 135 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 SSXP10-201ENST00000402595 565 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AL049693.1-201ENST00000402760 611 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
RHBDL3P58872 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.47□□□□□ -1.53
RHBDL3P58872 PSMA2P3-201ENST00000429685 675 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.47□□□□□ -1.53
RHBDL3P58872 CBX1P1-201ENST00000440184 427 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 RPL23AP93-201ENST00000440847 484 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDL3P58872 HMGB1P16-201ENST00000447155 540 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.47□□□□□ -1.53
RHBDL3P58872 BX276092.4-201ENST00000452056 248 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.47□□□□□ -1.53
RHBDL3P58872 TVP23BP2-201ENST00000455082 615 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 RPL23AP24-201ENST00000458203 385 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RHBDL3P58872 RNF138P1-201ENST00000502765 546 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AC011352.3-201ENST00000505162 593 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AC018797.3-201ENST00000513388 1241 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.47□□□□□ -1.53
RHBDL3P58872 AC092747.2-201ENST00000545069 983 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.47□□□□□ -1.53
RHBDL3P58872 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.47□□□□□ -1.53
RHBDL3P58872 MTCYBP27-201ENST00000555160 670 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.47□□□□□ -1.53
RHBDL3P58872 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.47□□□□□ -1.53
RHBDL3P58872 AC245884.10-201ENST00000597355 337 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDL3P58872 LLPHP1-201ENST00000603571 367 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 RPP40P2-201ENST00000603596 712 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AC007566.2-201ENST00000603642 413 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AC021749.1-201ENST00000604322 607 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AC090948.1-201ENST00000607464 549 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AC090912.3-201ENST00000609775 533 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDL3P58872 AL035461.2-201ENST00000619201 524 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AC068831.8-201ENST00000620171 435 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 AP005019.3-201ENST00000620418 560 ntBASIC5.47□□□□□ -1.53
RHBDL3P58872 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDL3P58872 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.47□□□□□ -1.53
RHBDL3P58872 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.47□□□□□ -1.53
RHBDL3P58872 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDL3P58872 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.47□□□□□ -1.53
RHBDL3P58872 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDL3P58872 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.47□□□□□ -1.53
RHBDL3P58872 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.47□□□□□ -1.53
RHBDL3P58872 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RHBDL3P58872 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.47□□□□□ -1.53
RHBDL3P58872 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.47□□□□□ -1.53
RHBDL3P58872 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.47□□□□□ -1.53
RHBDL3P58872 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.46□□□□□ -1.53
RHBDL3P58872 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.46□□□□□ -1.53
RHBDL3P58872 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RHBDL3P58872 AL391684.1-202ENST00000641293 1636 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 RNU1-85P-201ENST00000364127 164 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 SDHCP2-201ENST00000398565 501 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 RNU6-584P-201ENST00000410350 95 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 RPL21P108-201ENST00000413857 481 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 TMSB10P2-201ENST00000416049 131 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.46□□□□□ -1.54
RHBDL3P58872 COX6CP15-201ENST00000426313 211 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 OR4F13P-201ENST00000428478 931 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 RPL36P19-201ENST00000430744 301 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.46□□□□□ -1.54
RHBDL3P58872 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.46□□□□□ -1.54
RHBDL3P58872 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.46□□□□□ -1.54
RHBDL3P58872 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.46□□□□□ -1.54
RHBDL3P58872 PPIAP3-201ENST00000450588 505 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.46□□□□□ -1.54
RHBDL3P58872 AC087385.1-201ENST00000475062 312 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 AC005726.1-201ENST00000494679 427 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 RN7SKP277-201ENST00000516895 283 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.46□□□□□ -1.54
RHBDL3P58872 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.46□□□□□ -1.54
RHBDL3P58872 AP001180.3-201ENST00000582221 145 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 MIR4660-201ENST00000583549 74 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.46□□□□□ -1.54
RHBDL3P58872 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.46□□□□□ -1.54
RHBDL3P58872 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.46□□□□□ -1.54
RHBDL3P58872 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.46□□□□□ -1.54
RHBDL3P58872 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.46□□□□□ -1.54
RHBDL3P58872 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.46□□□□□ -1.54
RHBDL3P58872 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RHBDL3P58872 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RHBDL3P58872 AC009452.1-201ENST00000640823 606 ntBASIC5.46□□□□□ -1.54
RHBDL3P58872 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms