Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN18P56856 SNORA60-201ENST00000362396 134 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 Y_RNA.126-201ENST00000363382 111 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 RNA5SP391-201ENST00000363456 119 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN18P56856 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN18P56856 HNRNPDP2-201ENST00000406475 478 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 RNU6-628P-201ENST00000410675 107 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 PRELID3BP11-201ENST00000414230 479 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN18P56856 NPM1P34-201ENST00000428821 893 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN18P56856 RPS4XP4-201ENST00000443195 763 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN18P56856 RPL21P89-201ENST00000444021 467 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.67□□□□□ -1.82
CLDN18P56856 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN18P56856 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN18P56856 AC020898.1-201ENST00000474167 787 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 RPL29P14-201ENST00000495837 428 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN18P56856 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN18P56856 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CLDN18P56856 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN18P56856 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN18P56856 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.67□□□□□ -1.82
CLDN18P56856 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN18P56856 AL121594.4-201ENST00000556211 1196 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN18P56856 AC124068.1-201ENST00000563131 678 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 AL121834.1-201ENST00000572284 509 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN18P56856 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.67□□□□□ -1.82
CLDN18P56856 AC114878.2-201ENST00000604863 1251 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 AP005264.7-201ENST00000625003 745 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN18P56856 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN18P56856 MARK2P15-201ENST00000432204 2186 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN18P56856 DCAF13P1-201ENST00000495256 1330 ntBASIC3.67□□□□□ -1.82
CLDN18P56856 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN18P56856 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN18P56856 AC017007.4-201ENST00000503353 1352 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CLDN18P56856 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN18P56856 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN18P56856 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CLDN18P56856 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN18P56856 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN18P56856 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN18P56856 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN18P56856 RHOT1P2-201ENST00000366423 333 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 CCNB2P1-201ENST00000399411 1150 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 RNA5SP39-201ENST00000411245 120 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 AL512504.1-201ENST00000415494 778 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 RPL7P53-201ENST00000421245 739 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 AC008065.1-201ENST00000428525 348 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 FO393419.3-201ENST00000428741 282 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 NANOGP6-201ENST00000429190 847 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 AL358472.1-201ENST00000431295 329 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 AC023347.2-201ENST00000433994 462 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN18P56856 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN18P56856 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN18P56856 FABP3P2-201ENST00000453169 399 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 TPT1P3-201ENST00000492841 512 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 FTH1P21-201ENST00000512179 511 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 RNU7-143P-201ENST00000516781 65 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN18P56856 TRAV11-201ENST00000539512 339 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN18P56856 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN18P56856 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN18P56856 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN18P56856 AGGF1P6-201ENST00000569213 976 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 RPL23AP87-202ENST00000573039 466 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 MIR4644-201ENST00000579929 84 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.66□□□□□ -1.82
CLDN18P56856 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN18P56856 MTCO3P22-201ENST00000603219 784 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 SUMO2P14-201ENST00000604488 293 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 AC090246.1-201ENST00000616499 426 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 MIR4727-201ENST00000622232 55 ntBASIC3.66□□□□□ -1.82
CLDN18P56856 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN18P56856 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.65□□□□□ -1.82
CLDN18P56856 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLDN18P56856 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLDN18P56856 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLDN18P56856 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CLDN18P56856 RNA5SP52-201ENST00000362448 134 ntBASIC3.65□□□□□ -1.83
CLDN18P56856 RNA5SP167-201ENST00000365461 116 ntBASIC3.65□□□□□ -1.83
CLDN18P56856 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.65□□□□□ -1.83
CLDN18P56856 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
CLDN18P56856 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CLDN18P56856 AMD1P2-201ENST00000412936 992 ntBASIC3.65□□□□□ -1.83
CLDN18P56856 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN18P56856 OR5BE1P-201ENST00000425977 939 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms