Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.81□□□□□ -1.8
LIM2P55344 AC022968.1-201ENST00000567372 442 ntBASIC3.81□□□□□ -1.8
LIM2P55344 AC005972.3-201ENST00000606304 481 ntBASIC3.81□□□□□ -1.8
LIM2P55344 AC090948.2-201ENST00000607363 564 ntBASIC3.81□□□□□ -1.8
LIM2P55344 MIR6868-201ENST00000611215 58 ntBASIC3.81□□□□□ -1.8
LIM2P55344 AC106730.3-201ENST00000624568 641 ntBASIC3.81□□□□□ -1.8
LIM2P55344 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LIM2P55344 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LIM2P55344 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
LIM2P55344 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LIM2P55344 AC022031.1-201ENST00000585985 2593 ntBASIC3.81□□□□□ -1.8
LIM2P55344 AC022893.2-201ENST00000564832 3296 ntBASIC3.81□□□□□ -1.8
LIM2P55344 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
LIM2P55344 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LIM2P55344 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LIM2P55344 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LIM2P55344 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIM2P55344 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIM2P55344 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
LIM2P55344 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIM2P55344 MTCO1P4-201ENST00000520516 1409 ntBASIC3.8□□□□□ -1.8
LIM2P55344 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LIM2P55344 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LIM2P55344 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.8□□□□□ -1.8
LIM2P55344 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.8□□□□□ -1.8
LIM2P55344 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LIM2P55344 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIM2P55344 AC011155.1-201ENST00000316512 456 ntBASIC3.8□□□□□ -1.8
LIM2P55344 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.8□□□□□ -1.8
LIM2P55344 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIM2P55344 RNU1-13P-201ENST00000384499 162 ntBASIC3.8□□□□□ -1.8
LIM2P55344 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LIM2P55344 ATP5F1P2-201ENST00000398143 760 ntBASIC3.8□□□□□ -1.8
LIM2P55344 HMGB3P19-201ENST00000403971 560 ntBASIC3.8□□□□□ -1.8
LIM2P55344 VTA1P1-201ENST00000414044 866 ntBASIC3.8□□□□□ -1.8
LIM2P55344 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.8□□□□□ -1.8
LIM2P55344 RPS27AP12-201ENST00000429552 465 ntBASIC3.8□□□□□ -1.8
LIM2P55344 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.8□□□□□ -1.8
LIM2P55344 RPS20P1-201ENST00000434853 354 ntBASIC3.8□□□□□ -1.8
LIM2P55344 AL590762.3-201ENST00000436372 640 ntBASIC3.8□□□□□ -1.8
LIM2P55344 TMX2P1-201ENST00000436507 708 ntBASIC3.8□□□□□ -1.8
LIM2P55344 RPL7P29-201ENST00000437151 728 ntBASIC3.8□□□□□ -1.8
LIM2P55344 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.8□□□□□ -1.8
LIM2P55344 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.8□□□□□ -1.8
LIM2P55344 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.8□□□□□ -1.8
LIM2P55344 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LIM2P55344 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.8□□□□□ -1.8
LIM2P55344 FABP3P2-201ENST00000453169 399 ntBASIC3.8□□□□□ -1.8
LIM2P55344 RPL5P32-201ENST00000454085 879 ntBASIC3.8□□□□□ -1.8
LIM2P55344 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.8□□□□□ -1.8
LIM2P55344 RN7SL860P-201ENST00000473738 223 ntBASIC3.8□□□□□ -1.8
LIM2P55344 AL161747.1-201ENST00000480068 358 ntBASIC3.8□□□□□ -1.8
LIM2P55344 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.8□□□□□ -1.8
LIM2P55344 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.8□□□□□ -1.8
LIM2P55344 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LIM2P55344 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LIM2P55344 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.8□□□□□ -1.8
LIM2P55344 AC104229.1-201ENST00000561364 255 ntBASIC3.8□□□□□ -1.8
LIM2P55344 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.8□□□□□ -1.8
LIM2P55344 MIR4697-201ENST00000582977 78 ntBASIC3.8□□□□□ -1.8
LIM2P55344 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.8□□□□□ -1.8
LIM2P55344 AC092474.3-201ENST00000603022 568 ntBASIC3.8□□□□□ -1.8
LIM2P55344 AC006946.3-201ENST00000609791 756 ntBASIC3.8□□□□□ -1.8
LIM2P55344 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.8□□□□□ -1.8
LIM2P55344 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.8□□□□□ -1.8
LIM2P55344 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIM2P55344 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LIM2P55344 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIM2P55344 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.8□□□□□ -1.8
LIM2P55344 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIM2P55344 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIM2P55344 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LIM2P55344 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LIM2P55344 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIM2P55344 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIM2P55344 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
LIM2P55344 AC008432.1-201ENST00000615912 1320 ntBASIC3.79□□□□□ -1.8
LIM2P55344 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LIM2P55344 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LIM2P55344 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIM2P55344 RNU6-146P-201ENST00000384602 108 ntBASIC3.79□□□□□ -1.8
LIM2P55344 RPL21P65-201ENST00000406094 466 ntBASIC3.79□□□□□ -1.8
LIM2P55344 MIR1251-201ENST00000408552 70 ntBASIC3.79□□□□□ -1.8
LIM2P55344 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.79□□□□□ -1.8
LIM2P55344 AL158825.1-201ENST00000414735 521 ntBASIC3.79□□□□□ -1.8
LIM2P55344 LINC01881-201ENST00000416103 412 ntBASIC3.79□□□□□ -1.8
LIM2P55344 VN1R42P-201ENST00000424651 344 ntBASIC3.79□□□□□ -1.8
LIM2P55344 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.79□□□□□ -1.8
LIM2P55344 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.79□□□□□ -1.8
LIM2P55344 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.79□□□□□ -1.8
LIM2P55344 OR4C10P-201ENST00000434991 931 ntBASIC3.79□□□□□ -1.8
LIM2P55344 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.79□□□□□ -1.8
LIM2P55344 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.79□□□□□ -1.8
LIM2P55344 MTCYBP21-201ENST00000443300 1113 ntBASIC3.79□□□□□ -1.8
LIM2P55344 AC104306.1-201ENST00000449702 371 ntBASIC3.79□□□□□ -1.8
LIM2P55344 RPS11P1-201ENST00000451072 473 ntBASIC3.79□□□□□ -1.8
LIM2P55344 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.79□□□□□ -1.8
LIM2P55344 SETP6-201ENST00000479329 568 ntBASIC3.79□□□□□ -1.8
LIM2P55344 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.79□□□□□ -1.8
LIM2P55344 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms