Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH4P55283 RNA5SP52-201ENST00000362448 134 ntBASIC4.08□□□□□ -1.76
CDH4P55283 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.08□□□□□ -1.76
CDH4P55283 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH4P55283 RNU4-31P-201ENST00000384211 141 ntBASIC4.08□□□□□ -1.76
CDH4P55283 AL589655.1-201ENST00000405398 482 ntBASIC4.08□□□□□ -1.76
CDH4P55283 RNA5SP239-201ENST00000410218 129 ntBASIC4.08□□□□□ -1.76
CDH4P55283 RNA5SP104-201ENST00000410989 118 ntBASIC4.08□□□□□ -1.76
CDH4P55283 RANP4-201ENST00000413361 655 ntBASIC4.08□□□□□ -1.76
CDH4P55283 RPL7AP73-201ENST00000413490 353 ntBASIC4.08□□□□□ -1.76
CDH4P55283 LINC01881-201ENST00000416103 412 ntBASIC4.08□□□□□ -1.76
CDH4P55283 AL691447.1-201ENST00000419456 387 ntBASIC4.08□□□□□ -1.76
CDH4P55283 VDAC1P6-201ENST00000430062 855 ntBASIC4.08□□□□□ -1.76
CDH4P55283 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH4P55283 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH4P55283 MTND2P21-201ENST00000436242 1042 ntBASIC4.08□□□□□ -1.76
CDH4P55283 MED6P1-201ENST00000439659 713 ntBASIC4.08□□□□□ -1.76
CDH4P55283 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH4P55283 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH4P55283 MTND2P8-201ENST00000450555 1025 ntBASIC4.08□□□□□ -1.76
CDH4P55283 AL645939.1-201ENST00000453429 797 ntBASIC4.08□□□□□ -1.76
CDH4P55283 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH4P55283 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CDH4P55283 RNU6-775P-201ENST00000459318 96 ntBASIC4.08□□□□□ -1.76
CDH4P55283 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH4P55283 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH4P55283 AC097504.1-201ENST00000515103 2415 ntBASIC4.08□□□□□ -1.76
CDH4P55283 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.08□□□□□ -1.76
CDH4P55283 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH4P55283 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH4P55283 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH4P55283 AC069240.1-201ENST00000548774 375 ntBASIC4.08□□□□□ -1.76
CDH4P55283 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH4P55283 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.08□□□□□ -1.76
CDH4P55283 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH4P55283 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH4P55283 AC115085.1-201ENST00000588924 229 ntBASIC4.08□□□□□ -1.76
CDH4P55283 AC091167.4-201ENST00000605079 184 ntBASIC4.08□□□□□ -1.76
CDH4P55283 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.08□□□□□ -1.76
CDH4P55283 AC110792.4-201ENST00000609843 298 ntBASIC4.08□□□□□ -1.76
CDH4P55283 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH4P55283 RNF6P1-201ENST00000444889 1784 ntBASIC4.07□□□□□ -1.76
CDH4P55283 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH4P55283 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDH4P55283 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH4P55283 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH4P55283 AC095050.2-201ENST00000510748 1458 ntBASIC4.07□□□□□ -1.76
CDH4P55283 AP002001.2-201ENST00000529025 1469 ntBASIC4.07□□□□□ -1.76
CDH4P55283 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH4P55283 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CDH4P55283 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDH4P55283 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH4P55283 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH4P55283 RPS3AP6-201ENST00000484430 795 ntBASIC4.07□□□□□ -1.76
CDH4P55283 VN1R105P-201ENST00000486595 910 ntBASIC4.07□□□□□ -1.76
CDH4P55283 RPS4XP15-201ENST00000489210 795 ntBASIC4.07□□□□□ -1.76
CDH4P55283 AC092045.1-201ENST00000495716 1231 ntBASIC4.07□□□□□ -1.76
CDH4P55283 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.07□□□□□ -1.76
CDH4P55283 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH4P55283 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH4P55283 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH4P55283 YPEL5P3-201ENST00000547227 352 ntBASIC4.07□□□□□ -1.76
CDH4P55283 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.07□□□□□ -1.76
CDH4P55283 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH4P55283 AC007424.1-203ENST00000554613 687 ntBASIC4.07□□□□□ -1.76
CDH4P55283 OR4U1P-201ENST00000554958 912 ntBASIC4.07□□□□□ -1.76
CDH4P55283 AC106785.3-201ENST00000564064 847 ntBASIC4.07□□□□□ -1.76
CDH4P55283 AC245128.3-201ENST00000594721 748 ntBASIC4.07□□□□□ -1.76
CDH4P55283 AC010680.3-201ENST00000604215 520 ntBASIC4.07□□□□□ -1.76
CDH4P55283 AC099676.1-201ENST00000608886 657 ntBASIC4.07□□□□□ -1.76
CDH4P55283 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH4P55283 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.07□□□□□ -1.76
CDH4P55283 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH4P55283 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CDH4P55283 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH4P55283 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CDH4P55283 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH4P55283 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH4P55283 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH4P55283 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH4P55283 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH4P55283 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH4P55283 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH4P55283 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH4P55283 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
CDH4P55283 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH4P55283 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH4P55283 RN7SKP280-201ENST00000364196 304 ntBASIC4.06□□□□□ -1.76
CDH4P55283 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH4P55283 RNU6-213P-201ENST00000384051 104 ntBASIC4.06□□□□□ -1.76
CDH4P55283 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.06□□□□□ -1.76
CDH4P55283 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH4P55283 AC004552.1-201ENST00000419089 348 ntBASIC4.06□□□□□ -1.76
CDH4P55283 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH4P55283 CYP4F29P-201ENST00000420685 446 ntBASIC4.06□□□□□ -1.76
CDH4P55283 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH4P55283 AC083863.1-201ENST00000438811 231 ntBASIC4.06□□□□□ -1.76
CDH4P55283 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH4P55283 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH4P55283 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms