Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
EPHA4P54764 MTND4P14-201ENST00000435799 1354 ntBASIC6.31□□□□□ -1.4
EPHA4P54764 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
EPHA4P54764 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
EPHA4P54764 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHA4P54764 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
EPHA4P54764 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
EPHA4P54764 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
EPHA4P54764 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
EPHA4P54764 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHA4P54764 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
EPHA4P54764 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
EPHA4P54764 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHA4P54764 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHA4P54764 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHA4P54764 OR1S2-201ENST00000302592 978 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AC011155.1-201ENST00000316512 456 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 RNU1-65P-201ENST00000363919 148 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 Y_RNA.301-201ENST00000364990 103 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 RNY3P13-201ENST00000365542 102 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHA4P54764 RNU6-38P-201ENST00000384085 107 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 RNU6-574P-201ENST00000384265 107 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 RNU6-1106P-201ENST00000390845 107 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 CISD1P1-201ENST00000393907 327 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHA4P54764 AC074085.1-201ENST00000413598 418 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AC113618.1-201ENST00000416747 285 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 RPL36P19-201ENST00000430744 301 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHA4P54764 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.3□□□□□ -1.4
EPHA4P54764 AMYP1-201ENST00000440059 1023 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHA4P54764 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHA4P54764 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHA4P54764 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHA4P54764 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHA4P54764 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 NANOGP10-201ENST00000453325 895 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AC091685.2-201ENST00000454924 864 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHA4P54764 AC108059.3-201ENST00000456388 214 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 RNU6-333P-201ENST00000459117 107 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 RN7SL552P-201ENST00000462094 276 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 ATP5LP5-201ENST00000483050 299 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AC022415.1-202ENST00000486612 523 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 RN7SL561P-201ENST00000488553 281 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHA4P54764 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHA4P54764 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHA4P54764 Y_RNA.682-201ENST00000516457 100 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 RN7SKP219-201ENST00000516825 296 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHA4P54764 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHA4P54764 AC063950.1-201ENST00000552036 308 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC6.3□□□□□ -1.4
EPHA4P54764 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHA4P54764 AC026826.3-201ENST00000561747 158 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHA4P54764 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHA4P54764 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHA4P54764 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHA4P54764 MIR5095-201ENST00000578844 88 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.3□□□□□ -1.4
EPHA4P54764 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
EPHA4P54764 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.3□□□□□ -1.4
EPHA4P54764 AL592436.1-201ENST00000605135 558 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHA4P54764 SNORA74.4-201ENST00000607595 199 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AC090425.1-201ENST00000610007 140 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AC099494.2-201ENST00000623371 978 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 AC244517.12-201ENST00000623581 663 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 LINC02495-203ENST00000636704 242 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHA4P54764 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHA4P54764 AC007823.1-201ENST00000569932 1566 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHA4P54764 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHA4P54764 AP003486.1-201ENST00000525716 3994 ntBASIC6.3□□□□□ -1.4
EPHA4P54764 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.3□□□□□ -1.4
EPHA4P54764 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.3□□□□□ -1.4
EPHA4P54764 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
EPHA4P54764 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
EPHA4P54764 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
EPHA4P54764 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
EPHA4P54764 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
EPHA4P54764 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.29□□□□□ -1.4
EPHA4P54764 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
EPHA4P54764 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
EPHA4P54764 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
EPHA4P54764 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.29□□□□□ -1.4
EPHA4P54764 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.29□□□□□ -1.4
EPHA4P54764 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
EPHA4P54764 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
EPHA4P54764 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
EPHA4P54764 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
EPHA4P54764 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.29□□□□□ -1.4
EPHA4P54764 Y_RNA.28-201ENST00000362554 111 ntBASIC6.29□□□□□ -1.4
EPHA4P54764 RNU6-552P-201ENST00000362869 119 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms