Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COPB1P53618 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COPB1P53618 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COPB1P53618 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
COPB1P53618 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COPB1P53618 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.01□□□□□ -1.61
COPB1P53618 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COPB1P53618 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COPB1P53618 AC000123.3-201ENST00000624029 4975 ntBASIC5.01□□□□□ -1.61
COPB1P53618 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.01□□□□□ -1.61
COPB1P53618 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.01□□□□□ -1.61
COPB1P53618 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
COPB1P53618 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COPB1P53618 SNORD116-9-201ENST00000384000 95 ntBASIC5.01□□□□□ -1.61
COPB1P53618 RNU6-98P-201ENST00000384173 107 ntBASIC5.01□□□□□ -1.61
COPB1P53618 SNORD116-3-201ENST00000384287 95 ntBASIC5.01□□□□□ -1.61
COPB1P53618 SNORD116-7-201ENST00000384404 95 ntBASIC5.01□□□□□ -1.61
COPB1P53618 SNORD116-5-201ENST00000384462 95 ntBASIC5.01□□□□□ -1.61
COPB1P53618 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COPB1P53618 AC092745.2-202ENST00000411880 369 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.01□□□□□ -1.61
COPB1P53618 RPL7P53-201ENST00000421245 739 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AC011233.1-201ENST00000422812 283 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.01□□□□□ -1.61
COPB1P53618 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COPB1P53618 HMGB1P45-201ENST00000435986 653 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.01□□□□□ -1.61
COPB1P53618 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.01□□□□□ -1.61
COPB1P53618 RPL7P29-201ENST00000437151 728 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.01□□□□□ -1.61
COPB1P53618 MTND5P2-201ENST00000442927 1142 ntBASIC5.01□□□□□ -1.61
COPB1P53618 RPS26P30-201ENST00000443431 335 ntBASIC5.01□□□□□ -1.61
COPB1P53618 OR1H1P-201ENST00000448731 937 ntBASIC5.01□□□□□ -1.61
COPB1P53618 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.01□□□□□ -1.61
COPB1P53618 RPS3AP43-201ENST00000479743 781 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AC012158.1-204ENST00000483430 465 ntBASIC5.01□□□□□ -1.61
COPB1P53618 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COPB1P53618 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.01□□□□□ -1.61
COPB1P53618 STMN1P2-201ENST00000508435 439 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.01□□□□□ -1.61
COPB1P53618 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.01□□□□□ -1.61
COPB1P53618 RNU2-30P-201ENST00000516209 141 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.01□□□□□ -1.61
COPB1P53618 AC124293.1-201ENST00000530034 493 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.01□□□□□ -1.61
COPB1P53618 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.01□□□□□ -1.61
COPB1P53618 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.01□□□□□ -1.61
COPB1P53618 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.01□□□□□ -1.61
COPB1P53618 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.01□□□□□ -1.61
COPB1P53618 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.01□□□□□ -1.61
COPB1P53618 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
COPB1P53618 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.01□□□□□ -1.61
COPB1P53618 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.01□□□□□ -1.61
COPB1P53618 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.01□□□□□ -1.61
COPB1P53618 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.01□□□□□ -1.61
COPB1P53618 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.01□□□□□ -1.61
COPB1P53618 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.01□□□□□ -1.61
COPB1P53618 MIR5708-201ENST00000579723 85 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.01□□□□□ -1.61
COPB1P53618 MIR4480-201ENST00000582492 71 ntBASIC5.01□□□□□ -1.61
COPB1P53618 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.01□□□□□ -1.61
COPB1P53618 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.01□□□□□ -1.61
COPB1P53618 AC011487.3-201ENST00000593607 453 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.01□□□□□ -1.61
COPB1P53618 AC025165.5-201ENST00000602802 578 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AC103792.1-201ENST00000603591 919 ntBASIC5.01□□□□□ -1.61
COPB1P53618 BNIP3P4-201ENST00000604946 565 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AC080013.3-201ENST00000606839 578 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AC023509.5-201ENST00000617434 807 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
COPB1P53618 AL157770.1-201ENST00000623049 439 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AC091905.2-201ENST00000623143 306 ntBASIC5.01□□□□□ -1.61
COPB1P53618 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.01□□□□□ -1.61
COPB1P53618 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COPB1P53618 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COPB1P53618 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
COPB1P53618 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.01□□□□□ -1.61
COPB1P53618 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COPB1P53618 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.01□□□□□ -1.61
COPB1P53618 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COPB1P53618 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.01□□□□□ -1.61
COPB1P53618 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.01□□□□□ -1.61
COPB1P53618 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COPB1P53618 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COPB1P53618 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
COPB1P53618 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5□□□□□ -1.61
COPB1P53618 AL049737.1-201ENST00000413920 1403 ntBASIC5□□□□□ -1.61
COPB1P53618 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5□□□□□ -1.61
COPB1P53618 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
COPB1P53618 RNU1-63P-201ENST00000383902 164 ntBASIC5□□□□□ -1.61
COPB1P53618 ATP5F1P3-201ENST00000397213 657 ntBASIC5□□□□□ -1.61
COPB1P53618 AL109941.1-201ENST00000401925 229 ntBASIC5□□□□□ -1.61
COPB1P53618 SEPT2P1-201ENST00000419651 180 ntBASIC5□□□□□ -1.61
COPB1P53618 OR6K4P-201ENST00000423179 955 ntBASIC5□□□□□ -1.61
COPB1P53618 AP001324.1-201ENST00000428553 399 ntBASIC5□□□□□ -1.61
COPB1P53618 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5□□□□□ -1.61
COPB1P53618 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5□□□□□ -1.61
COPB1P53618 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5□□□□□ -1.61
COPB1P53618 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms