Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 MIR6758-201ENST00000620653 63 ntBASIC3.34□□□□□ -1.87
POLR2JP52435 AC112200.1-201ENST00000625015 234 ntBASIC3.34□□□□□ -1.87
POLR2JP52435 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.34□□□□□ -1.87
POLR2JP52435 MFSD8-233ENST00000641482 4860 ntBASIC3.34□□□□□ -1.87
POLR2JP52435 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
POLR2JP52435 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
POLR2JP52435 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
POLR2JP52435 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.34□□□□□ -1.87
POLR2JP52435 NR1H5P-201ENST00000452683 1377 ntBASIC3.34□□□□□ -1.88
POLR2JP52435 OTUD4P1-201ENST00000237841 3067 ntBASIC3.34□□□□□ -1.88
POLR2JP52435 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.34□□□□□ -1.88
POLR2JP52435 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
POLR2JP52435 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
POLR2JP52435 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
POLR2JP52435 FRG1CP-201ENST00000358464 769 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 RPL32P3-201ENST00000359025 275 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 RNU6-178P-201ENST00000384631 104 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 SKINT1L-201ENST00000401057 817 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 MIR937-201ENST00000401271 86 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 RPS7P13-201ENST00000413955 498 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 AC093578.1-201ENST00000415219 368 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 RANP7-201ENST00000418085 644 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 RWDD4P2-201ENST00000426392 563 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 FAR1P1-201ENST00000427163 934 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 RPL23AP82-202ENST00000427528 469 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 TXNP1-201ENST00000441872 371 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 EIF2S2P4-201ENST00000461070 984 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 CENPBD1P1-201ENST00000464061 469 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 VN1R105P-201ENST00000486595 910 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 RWDD4P1-201ENST00000488019 565 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 HMGB1P21-201ENST00000502313 581 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 HPRT1P1-201ENST00000509498 657 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR2JP52435 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR2JP52435 AC026402.1-201ENST00000513642 170 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 AC107934.2-201ENST00000518653 310 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 MED28P5-201ENST00000528254 438 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 CBX3P5-201ENST00000552017 521 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 AC007424.1-203ENST00000554613 687 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.33□□□□□ -1.88
POLR2JP52435 MIR4286-201ENST00000580651 93 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 AC008507.1-201ENST00000587506 734 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 AC011492.1-201ENST00000600023 315 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.33□□□□□ -1.88
POLR2JP52435 RNA5SP196-201ENST00000625967 102 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR2JP52435 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
POLR2JP52435 AC007342.7-201ENST00000624610 2337 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 AC095050.2-201ENST00000510748 1458 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
POLR2JP52435 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
POLR2JP52435 ASNSP1-204ENST00000641977 1664 ntBASIC3.33□□□□□ -1.88
POLR2JP52435 AC007496.3-201ENST00000624987 3443 ntBASIC3.32□□□□□ -1.88
POLR2JP52435 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR2JP52435 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR2JP52435 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
POLR2JP52435 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR2JP52435 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR2JP52435 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR2JP52435 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
POLR2JP52435 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
POLR2JP52435 PPIAP31-201ENST00000405422 495 ntBASIC3.32□□□□□ -1.88
POLR2JP52435 RNU6-628P-201ENST00000410675 107 ntBASIC3.32□□□□□ -1.88
POLR2JP52435 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.32□□□□□ -1.88
POLR2JP52435 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.32□□□□□ -1.88
POLR2JP52435 HMGN1P18-201ENST00000457642 277 ntBASIC3.32□□□□□ -1.88
POLR2JP52435 GAPDHP36-201ENST00000480688 918 ntBASIC3.32□□□□□ -1.88
POLR2JP52435 RN7SL809P-201ENST00000482040 297 ntBASIC3.32□□□□□ -1.88
POLR2JP52435 AC092045.1-201ENST00000495716 1231 ntBASIC3.32□□□□□ -1.88
POLR2JP52435 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
POLR2JP52435 AC007991.1-201ENST00000522680 631 ntBASIC3.32□□□□□ -1.88
POLR2JP52435 DEFB109D-201ENST00000529497 240 ntBASIC3.32□□□□□ -1.88
POLR2JP52435 AC004024.1-201ENST00000549244 247 ntBASIC3.32□□□□□ -1.88
POLR2JP52435 AC022146.1-201ENST00000595307 847 ntBASIC3.32□□□□□ -1.88
POLR2JP52435 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR2JP52435 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
POLR2JP52435 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
POLR2JP52435 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
POLR2JP52435 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR2JP52435 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
POLR2JP52435 AC007823.1-201ENST00000569932 1566 ntBASIC3.31□□□□□ -1.88
POLR2JP52435 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR2JP52435 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
POLR2JP52435 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR2JP52435 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.31□□□□□ -1.88
POLR2JP52435 AL049693.1-201ENST00000402760 611 ntBASIC3.31□□□□□ -1.88
POLR2JP52435 AL136131.1-201ENST00000406079 803 ntBASIC3.31□□□□□ -1.88
POLR2JP52435 SSR1P1-201ENST00000407630 814 ntBASIC3.31□□□□□ -1.88
POLR2JP52435 RNA5SP107-201ENST00000411358 122 ntBASIC3.31□□□□□ -1.88
POLR2JP52435 AC017079.2-201ENST00000416102 485 ntBASIC3.31□□□□□ -1.88
POLR2JP52435 RPS15AP6-201ENST00000420703 385 ntBASIC3.31□□□□□ -1.88
POLR2JP52435 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR2JP52435 AC097262.1-201ENST00000452559 548 ntBASIC3.31□□□□□ -1.88
POLR2JP52435 TRBV8-2-201ENST00000475637 270 ntBASIC3.31□□□□□ -1.88
POLR2JP52435 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR2JP52435 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.31□□□□□ -1.88
POLR2JP52435 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.31□□□□□ -1.88
POLR2JP52435 MIR2116-201ENST00000517221 80 ntBASIC3.31□□□□□ -1.88
POLR2JP52435 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.31□□□□□ -1.88
POLR2JP52435 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms