Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC079841.1-201ENST00000481228 950 ntBASIC4.43□□□□□ -1.7
SOX2P48431 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.43□□□□□ -1.7
SOX2P48431 RNU2-30P-201ENST00000516209 141 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX2P48431 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX2P48431 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX2P48431 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX2P48431 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX2P48431 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX2P48431 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX2P48431 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX2P48431 AL391156.1-201ENST00000554965 554 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX2P48431 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.43□□□□□ -1.7
SOX2P48431 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 AC006362.1-201ENST00000567392 174 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX2P48431 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX2P48431 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX2P48431 AC008507.1-201ENST00000587506 734 ntBASIC4.43□□□□□ -1.7
SOX2P48431 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX2P48431 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.43□□□□□ -1.7
SOX2P48431 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 AC069304.2-201ENST00000605154 435 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AC128687.1-201ENST00000605304 619 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AC116651.1-201ENST00000609724 556 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AC009878.1-201ENST00000621819 340 ntBASIC4.43□□□□□ -1.7
SOX2P48431 MIR8080-201ENST00000622224 89 ntBASIC4.43□□□□□ -1.7
SOX2P48431 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SOX2P48431 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.43□□□□□ -1.7
SOX2P48431 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 AC092104.1-201ENST00000497346 1441 ntBASIC4.43□□□□□ -1.7
SOX2P48431 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 AP001642.1-201ENST00000624727 2117 ntBASIC4.43□□□□□ -1.7
SOX2P48431 AC139713.2-215ENST00000641428 5037 ntBASIC4.43□□□□□ -1.7
SOX2P48431 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX2P48431 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.43□□□□□ -1.7
SOX2P48431 ZNF652P1-201ENST00000442420 1309 ntBASIC4.43□□□□□ -1.7
SOX2P48431 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SOX2P48431 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 MTND5P24-201ENST00000438892 1767 ntBASIC4.42□□□□□ -1.7
SOX2P48431 SALL4P2-201ENST00000423288 2910 ntBASIC4.42□□□□□ -1.7
SOX2P48431 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SOX2P48431 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SOX2P48431 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
SOX2P48431 AC010329.2-201ENST00000595195 2737 ntBASIC4.42□□□□□ -1.7
SOX2P48431 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SOX2P48431 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 RNU4-21P-201ENST00000362802 126 ntBASIC4.42□□□□□ -1.7
SOX2P48431 RNU4-75P-201ENST00000364621 146 ntBASIC4.42□□□□□ -1.7
SOX2P48431 Y_RNA.302-201ENST00000364997 102 ntBASIC4.42□□□□□ -1.7
SOX2P48431 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.42□□□□□ -1.7
SOX2P48431 OR5H15-201ENST00000383696 930 ntBASIC4.42□□□□□ -1.7
SOX2P48431 RNA5SP284-201ENST00000384547 118 ntBASIC4.42□□□□□ -1.7
SOX2P48431 MIR506-201ENST00000384998 124 ntBASIC4.42□□□□□ -1.7
SOX2P48431 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SOX2P48431 RPL23AP29-201ENST00000397284 453 ntBASIC4.42□□□□□ -1.7
SOX2P48431 PRRC2CP1-201ENST00000404428 159 ntBASIC4.42□□□□□ -1.7
SOX2P48431 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.42□□□□□ -1.7
SOX2P48431 RN7SKP142-201ENST00000411236 328 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.42□□□□□ -1.7
SOX2P48431 PRELID3BP11-201ENST00000414230 479 ntBASIC4.42□□□□□ -1.7
SOX2P48431 RPL24P2-201ENST00000421023 475 ntBASIC4.42□□□□□ -1.7
SOX2P48431 EI24P4-201ENST00000423683 1078 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AC009965.2-201ENST00000425328 970 ntBASIC4.42□□□□□ -1.7
SOX2P48431 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.42□□□□□ -1.7
SOX2P48431 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.42□□□□□ -1.7
SOX2P48431 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.42□□□□□ -1.7
SOX2P48431 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.42□□□□□ -1.7
SOX2P48431 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.42□□□□□ -1.7
SOX2P48431 AC010881.1-201ENST00000433830 235 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.42□□□□□ -1.7
SOX2P48431 TMX2P1-201ENST00000436507 708 ntBASIC4.42□□□□□ -1.7
SOX2P48431 MUPP-201ENST00000438111 566 ntBASIC4.42□□□□□ -1.7
SOX2P48431 HMGN1P2-201ENST00000445197 310 ntBASIC4.42□□□□□ -1.7
SOX2P48431 SLC31A1P1-201ENST00000451221 567 ntBASIC4.42□□□□□ -1.7
SOX2P48431 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.42□□□□□ -1.7
SOX2P48431 YWHAEP1-201ENST00000453697 763 ntBASIC4.42□□□□□ -1.7
SOX2P48431 HMGN3P1-201ENST00000453847 193 ntBASIC4.42□□□□□ -1.7
SOX2P48431 RPL18AP17-201ENST00000455326 198 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AC006511.1-201ENST00000470614 315 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AC116337.2-201ENST00000477662 156 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AC090686.1-201ENST00000481577 749 ntBASIC4.42□□□□□ -1.7
SOX2P48431 RN7SL591P-201ENST00000496150 292 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AC108078.3-201ENST00000502633 489 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms