Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC020910.3-201ENST00000603701 874 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AC005084.1-201ENST00000605160 304 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AC091946.2-201ENST00000606105 291 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.52□□□□□ -1.69
ABCD3P28288 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
ABCD3P28288 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.52□□□□□ -1.69
ABCD3P28288 AC087385.3-201ENST00000620477 187 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 MIR6715B-201ENST00000637172 77 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.52□□□□□ -1.69
ABCD3P28288 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ABCD3P28288 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ABCD3P28288 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.52□□□□□ -1.69
ABCD3P28288 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ABCD3P28288 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ABCD3P28288 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
ABCD3P28288 AC074029.4-201ENST00000624796 1859 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ABCD3P28288 AC008758.3-201ENST00000507003 1829 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.51□□□□□ -1.69
ABCD3P28288 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
ABCD3P28288 AL592148.3-201ENST00000608771 2646 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ABCD3P28288 CDR1-202ENST00000625883 1485 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ABCD3P28288 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.51□□□□□ -1.69
ABCD3P28288 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.51□□□□□ -1.69
ABCD3P28288 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ABCD3P28288 Y_RNA.25-201ENST00000362528 102 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
ABCD3P28288 MIR550A3-201ENST00000390735 95 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.51□□□□□ -1.69
ABCD3P28288 AC136624.1-201ENST00000400791 413 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 RNA5SP80-201ENST00000410475 111 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 RNA5SP345-201ENST00000410646 108 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.51□□□□□ -1.69
ABCD3P28288 KRR1P1-201ENST00000419430 803 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 RPL31P45-201ENST00000419532 356 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 MTCO2P21-201ENST00000419780 677 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AL590762.4-201ENST00000425885 253 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ABCD3P28288 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.51□□□□□ -1.69
ABCD3P28288 PSMA2P3-201ENST00000429685 675 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 VDAC1P6-201ENST00000430062 855 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 RPS27P18-201ENST00000431701 247 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AC092162.1-201ENST00000432828 434 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.51□□□□□ -1.69
ABCD3P28288 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.51□□□□□ -1.69
ABCD3P28288 ELOCP13-201ENST00000443934 329 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.51□□□□□ -1.69
ABCD3P28288 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.51□□□□□ -1.69
ABCD3P28288 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ABCD3P28288 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.51□□□□□ -1.69
ABCD3P28288 AL356981.1-201ENST00000454879 684 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.51□□□□□ -1.69
ABCD3P28288 RPS3AP41-201ENST00000462701 778 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 RPL21P103-201ENST00000479921 488 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AC090686.1-201ENST00000481577 749 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AC013828.1-201ENST00000481845 158 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 NIP7P2-201ENST00000485801 544 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ABCD3P28288 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.51□□□□□ -1.69
ABCD3P28288 AC118282.1-201ENST00000506408 765 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ABCD3P28288 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.51□□□□□ -1.69
ABCD3P28288 RN7SKP287-201ENST00000516546 266 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 RNA5SP392-201ENST00000516905 112 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 Y_RNA.719-201ENST00000517156 106 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.51□□□□□ -1.69
ABCD3P28288 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.51□□□□□ -1.69
ABCD3P28288 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.51□□□□□ -1.69
ABCD3P28288 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.51□□□□□ -1.69
ABCD3P28288 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.51□□□□□ -1.69
ABCD3P28288 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.51□□□□□ -1.69
ABCD3P28288 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.51□□□□□ -1.69
ABCD3P28288 AC009117.1-201ENST00000563948 554 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.51□□□□□ -1.69
ABCD3P28288 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.51□□□□□ -1.69
ABCD3P28288 MIR3934-201ENST00000579806 107 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AP001180.3-201ENST00000582221 145 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.51□□□□□ -1.69
ABCD3P28288 AC091057.2-201ENST00000602594 792 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AC009220.3-201ENST00000604318 586 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AC093424.1-201ENST00000604999 338 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 IMMP1LP1-201ENST00000605170 488 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AC010424.2-201ENST00000607594 443 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 AC097478.2-201ENST00000610572 514 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 CR381572.2-201ENST00000624852 397 ntBASIC4.51□□□□□ -1.69
ABCD3P28288 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.51□□□□□ -1.69
ABCD3P28288 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ABCD3P28288 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ABCD3P28288 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.51□□□□□ -1.69
ABCD3P28288 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.51□□□□□ -1.69
ABCD3P28288 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
ABCD3P28288 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ABCD3P28288 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
ABCD3P28288 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.5□□□□□ -1.69
ABCD3P28288 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ABCD3P28288 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.5□□□□□ -1.69
ABCD3P28288 AC000123.3-201ENST00000624029 4975 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms