Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CDRT1-208ENST00000630868 794 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
NFKB1P19838 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
NFKB1P19838 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NFKB1P19838 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
NFKB1P19838 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
NFKB1P19838 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.26□□□□□ -1.41
NFKB1P19838 AL355377.1-201ENST00000621125 1653 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 AC006020.1-201ENST00000420179 1854 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NFKB1P19838 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.26□□□□□ -1.41
NFKB1P19838 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.26□□□□□ -1.41
NFKB1P19838 AC107021.2-201ENST00000567714 2095 ntBASIC6.26□□□□□ -1.41
NFKB1P19838 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NFKB1P19838 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.25□□□□□ -1.41
NFKB1P19838 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.25□□□□□ -1.41
NFKB1P19838 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
NFKB1P19838 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.25□□□□□ -1.41
NFKB1P19838 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
NFKB1P19838 RNA5SP375-201ENST00000362975 119 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 Y_RNA.401-201ENST00000383965 117 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 SNORA70.9-201ENST00000384370 135 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 RNU6-1297P-201ENST00000384415 104 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 RNU6-331P-201ENST00000384724 107 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 MIR188-201ENST00000385034 86 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 AL356057.3-201ENST00000402607 340 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 AL139805.1-201ENST00000407837 289 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.25□□□□□ -1.41
NFKB1P19838 RN7SKP144-201ENST00000411108 279 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.25□□□□□ -1.41
NFKB1P19838 UQCRBP1-201ENST00000421129 336 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 RGS17P1-201ENST00000423358 553 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 AC016027.5-201ENST00000427227 210 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 RPS24P8-201ENST00000431490 402 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 GPR143P-201ENST00000434155 205 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 HMGB3P10-201ENST00000434734 572 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 OR3D1P-201ENST00000438288 955 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.25□□□□□ -1.41
NFKB1P19838 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.25□□□□□ -1.41
NFKB1P19838 PPP1R2P5-201ENST00000457256 603 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.25□□□□□ -1.41
NFKB1P19838 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC6.25□□□□□ -1.41
NFKB1P19838 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.25□□□□□ -1.41
NFKB1P19838 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.25□□□□□ -1.41
NFKB1P19838 AC109481.1-201ENST00000509173 282 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 TMEM248P1-201ENST00000510579 951 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 AC005741.1-201ENST00000511094 432 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.25□□□□□ -1.41
NFKB1P19838 AC036111.2-201ENST00000533247 901 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.25□□□□□ -1.41
NFKB1P19838 AC018630.1-201ENST00000541376 925 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.25□□□□□ -1.41
NFKB1P19838 AP001823.1-201ENST00000604056 1003 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 AC080078.3-201ENST00000605407 463 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 AC141002.1-201ENST00000607025 279 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 OR10AB1P-201ENST00000609613 938 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 AC090425.1-201ENST00000610007 140 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 RN7SL261P-201ENST00000613441 282 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 AC015712.7-201ENST00000615211 635 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 U1.34-201ENST00000618578 162 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.25□□□□□ -1.41
NFKB1P19838 AC022106.2-201ENST00000620114 757 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 AL162377.2-201ENST00000624532 337 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 AC099654.15-201ENST00000639802 509 ntBASIC6.25□□□□□ -1.41
NFKB1P19838 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.25□□□□□ -1.41
NFKB1P19838 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
NFKB1P19838 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
NFKB1P19838 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.25□□□□□ -1.41
NFKB1P19838 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.25□□□□□ -1.41
NFKB1P19838 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NFKB1P19838 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.25□□□□□ -1.41
NFKB1P19838 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NFKB1P19838 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NFKB1P19838 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.24□□□□□ -1.41
NFKB1P19838 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
NFKB1P19838 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NFKB1P19838 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
NFKB1P19838 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NFKB1P19838 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
NFKB1P19838 AC011155.1-201ENST00000316512 456 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 Y_RNA.255-201ENST00000364581 97 ntBASIC6.24□□□□□ -1.41
NFKB1P19838 RNU6-169P-201ENST00000365336 107 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms