Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RAD23BP1-201ENST00000421404 1227 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 MTCYBP5-201ENST00000423752 1135 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.53□□□□□ -1.36
ERCC3P19447 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.53□□□□□ -1.36
ERCC3P19447 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ERCC3P19447 AC244505.5-201ENST00000443639 207 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.53□□□□□ -1.36
ERCC3P19447 EIF4A1P11-201ENST00000451239 222 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 AC005532.2-201ENST00000467154 373 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 RN7SL51P-201ENST00000468230 285 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 TMED11P-201ENST00000479478 690 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 PDCL3P4-201ENST00000489621 720 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 RPL7P24-201ENST00000493052 752 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.53□□□□□ -1.36
ERCC3P19447 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.53□□□□□ -1.36
ERCC3P19447 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.53□□□□□ -1.36
ERCC3P19447 AP006245.2-201ENST00000522004 300 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.53□□□□□ -1.36
ERCC3P19447 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ERCC3P19447 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.53□□□□□ -1.36
ERCC3P19447 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.53□□□□□ -1.36
ERCC3P19447 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.53□□□□□ -1.36
ERCC3P19447 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.53□□□□□ -1.36
ERCC3P19447 AC009063.1-201ENST00000563342 702 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC3P19447 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC6.53□□□□□ -1.36
ERCC3P19447 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC6.53□□□□□ -1.36
ERCC3P19447 AC090312.1-201ENST00000580637 348 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.53□□□□□ -1.36
ERCC3P19447 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.53□□□□□ -1.36
ERCC3P19447 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.53□□□□□ -1.36
ERCC3P19447 RBM11P1-201ENST00000604951 799 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 AC090607.5-201ENST00000615692 224 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 MIR7155-201ENST00000615925 56 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 AC037198.3-201ENST00000616754 526 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.53□□□□□ -1.36
ERCC3P19447 AC099654.12-201ENST00000639868 649 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 AC144833.1-201ENST00000567953 4089 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC3P19447 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
ERCC3P19447 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
ERCC3P19447 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC3P19447 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC3P19447 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
ERCC3P19447 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
ERCC3P19447 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC3P19447 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC3P19447 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC3P19447 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
ERCC3P19447 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
ERCC3P19447 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.52□□□□□ -1.37
ERCC3P19447 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.52□□□□□ -1.37
ERCC3P19447 MAPK10-338ENST00000641647 3362 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
ERCC3P19447 RPL23AP57-201ENST00000332361 466 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 RNU6-259P-201ENST00000383999 107 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 RNU6-178P-201ENST00000384631 104 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
ERCC3P19447 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC6.52□□□□□ -1.37
ERCC3P19447 TPMTP2-201ENST00000414372 726 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 AL139148.1-201ENST00000427122 680 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 GCA-203ENST00000429691 824 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC3P19447 RPL7L1P9-201ENST00000431298 745 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 USP24P1-201ENST00000433802 779 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 CNOT7P2-201ENST00000441051 832 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.52□□□□□ -1.37
ERCC3P19447 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC3P19447 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC3P19447 AC093899.1-201ENST00000457984 376 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 AL136126.1-201ENST00000473603 402 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 AC090453.1-201ENST00000495560 436 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 AL358832.1-201ENST00000497800 389 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.52□□□□□ -1.37
ERCC3P19447 TOMM22P4-201ENST00000511318 336 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6.52□□□□□ -1.37
ERCC3P19447 MTND4LP26-201ENST00000518144 282 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 OR5M7P-201ENST00000526140 972 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
ERCC3P19447 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.52□□□□□ -1.37
ERCC3P19447 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.52□□□□□ -1.37
ERCC3P19447 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.52□□□□□ -1.37
ERCC3P19447 MIR4307-201ENST00000582802 84 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.52□□□□□ -1.37
ERCC3P19447 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC6.52□□□□□ -1.37
ERCC3P19447 AC006363.1-201ENST00000603806 463 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 AC025588.4-201ENST00000615802 908 ntBASIC6.52□□□□□ -1.37
ERCC3P19447 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC3P19447 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC3P19447 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC3P19447 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC3P19447 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
ERCC3P19447 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC3P19447 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC3P19447 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.52□□□□□ -1.37
ERCC3P19447 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.52□□□□□ -1.37
ERCC3P19447 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC3P19447 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ERCC3P19447 AC104964.3-201ENST00000606115 2860 ntBASIC6.51□□□□□ -1.37
ERCC3P19447 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ERCC3P19447 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms