Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.06□□□□□ -1.76
XRCC1P18887 MTND4P15-201ENST00000437913 1033 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.06□□□□□ -1.76
XRCC1P18887 AF228730.2-201ENST00000438784 848 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 RPL23AP23-201ENST00000452590 471 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.06□□□□□ -1.76
XRCC1P18887 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.06□□□□□ -1.76
XRCC1P18887 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.06□□□□□ -1.76
XRCC1P18887 AC109458.1-201ENST00000508858 316 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 HAUS1P3-201ENST00000523909 662 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 AP003168.1-201ENST00000530091 307 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.06□□□□□ -1.76
XRCC1P18887 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.06□□□□□ -1.76
XRCC1P18887 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.06□□□□□ -1.76
XRCC1P18887 AC093014.1-201ENST00000548926 724 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.06□□□□□ -1.76
XRCC1P18887 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.06□□□□□ -1.76
XRCC1P18887 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.06□□□□□ -1.76
XRCC1P18887 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.06□□□□□ -1.76
XRCC1P18887 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.06□□□□□ -1.76
XRCC1P18887 AC020914.4-201ENST00000597690 277 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 KATNBL1P5-201ENST00000605015 517 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 RNU4-89P-201ENST00000607443 133 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 OR6R2P-201ENST00000609216 300 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 AC055764.2-201ENST00000610089 670 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 MIR1264-201ENST00000616374 69 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
XRCC1P18887 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
XRCC1P18887 FAM35DP-201ENST00000323387 2712 ntBASIC4.06□□□□□ -1.76
XRCC1P18887 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
XRCC1P18887 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.06□□□□□ -1.76
XRCC1P18887 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
XRCC1P18887 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
XRCC1P18887 AC027287.1-201ENST00000553115 1453 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
XRCC1P18887 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
XRCC1P18887 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
XRCC1P18887 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.05□□□□□ -1.76
XRCC1P18887 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.05□□□□□ -1.76
XRCC1P18887 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.05□□□□□ -1.76
XRCC1P18887 SPRR2C-201ENST00000290702 219 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
XRCC1P18887 RNA5SP322-201ENST00000363617 119 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 MIR92A2-201ENST00000385299 75 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 OR8G2P-201ENST00000412796 908 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 SEC63P1-201ENST00000425785 1258 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.05□□□□□ -1.76
XRCC1P18887 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.05□□□□□ -1.76
XRCC1P18887 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.05□□□□□ -1.76
XRCC1P18887 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.05□□□□□ -1.76
XRCC1P18887 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.05□□□□□ -1.76
XRCC1P18887 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.05□□□□□ -1.76
XRCC1P18887 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.05□□□□□ -1.76
XRCC1P18887 AL353718.1-201ENST00000451028 517 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
XRCC1P18887 MTND2P6-201ENST00000455337 1030 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 NPM1P17-201ENST00000479221 602 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 AF213884.1-201ENST00000488102 463 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 AL132838.2-201ENST00000492041 314 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 RN7SL604P-201ENST00000492589 296 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 AC146944.2-203ENST00000502493 354 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.05□□□□□ -1.76
XRCC1P18887 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.05□□□□□ -1.76
XRCC1P18887 MTND2P31-201ENST00000512602 616 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 AC139495.1-202ENST00000513164 354 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.05□□□□□ -1.76
XRCC1P18887 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.05□□□□□ -1.76
XRCC1P18887 OR8R1P-201ENST00000543943 764 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 AC084824.1-201ENST00000550917 1005 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 AC025918.2-201ENST00000558683 763 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.05□□□□□ -1.76
XRCC1P18887 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.05□□□□□ -1.76
XRCC1P18887 AC022655.2-201ENST00000577280 318 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
XRCC1P18887 AC007423.1-201ENST00000605009 627 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 AL450270.1-201ENST00000606160 391 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 AC243654.2-201ENST00000612843 443 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
XRCC1P18887 AC004825.2-201ENST00000616634 455 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.05□□□□□ -1.76
XRCC1P18887 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
XRCC1P18887 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.05□□□□□ -1.76
XRCC1P18887 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
XRCC1P18887 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
XRCC1P18887 AL592437.2-201ENST00000421655 2434 ntBASIC4.05□□□□□ -1.76
XRCC1P18887 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
XRCC1P18887 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.05□□□□□ -1.76
XRCC1P18887 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
XRCC1P18887 AC083899.2-201ENST00000423285 1376 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
XRCC1P18887 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
XRCC1P18887 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
XRCC1P18887 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
XRCC1P18887 OR11H4-201ENST00000315409 1082 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 RNA5SP130-201ENST00000364431 114 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 RNU1-89P-201ENST00000384592 164 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 PPIAP31-201ENST00000405422 495 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 HMGB1P13-201ENST00000406019 642 ntBASIC4.04□□□□□ -1.76
XRCC1P18887 TATDN1P1-201ENST00000414123 891 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms