Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SAGE2P-201ENST00000420011 2126 ntBASIC4.49□□□□□ -1.69
PDGFRAP16234 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.49□□□□□ -1.69
PDGFRAP16234 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFRAP16234 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDGFRAP16234 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PDGFRAP16234 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.48□□□□□ -1.69
PDGFRAP16234 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFRAP16234 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PDGFRAP16234 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFRAP16234 AC046144.1-201ENST00000478559 1853 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFRAP16234 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFRAP16234 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PDGFRAP16234 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PDGFRAP16234 AL158163.1-201ENST00000603915 1649 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFRAP16234 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
PDGFRAP16234 RPL22P22-201ENST00000395439 379 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
PDGFRAP16234 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFRAP16234 RNA5SP146-201ENST00000410743 123 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFRAP16234 MFSD13B-201ENST00000420133 1290 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 AC234779.1-201ENST00000425910 285 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 DEFB130D-201ENST00000426866 237 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 AC091390.1-201ENST00000433904 331 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFRAP16234 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFRAP16234 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.48□□□□□ -1.69
PDGFRAP16234 FGF7P3-201ENST00000454645 303 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 AC104689.1-201ENST00000473356 768 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 AC104164.2-201ENST00000496953 495 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFRAP16234 PPBPP1-201ENST00000510807 373 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 AC018797.3-201ENST00000513388 1241 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 RN7SKP122-201ENST00000515923 296 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.48□□□□□ -1.69
PDGFRAP16234 AC022790.1-201ENST00000522872 204 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 TRAV8-5-201ENST00000537369 341 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 MIR3939-201ENST00000582614 106 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFRAP16234 MIR3138-201ENST00000585238 82 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFRAP16234 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.48□□□□□ -1.69
PDGFRAP16234 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFRAP16234 AC008759.3-201ENST00000613300 508 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 AC018926.1-201ENST00000616335 435 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 AC243756.2-201ENST00000618406 463 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFRAP16234 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.48□□□□□ -1.69
PDGFRAP16234 AC017104.5-201ENST00000637647 639 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.48□□□□□ -1.69
PDGFRAP16234 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFRAP16234 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFRAP16234 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFRAP16234 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PDGFRAP16234 NSRP1P1-201ENST00000444067 1693 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 ASNSP1-204ENST00000641977 1664 ntBASIC4.48□□□□□ -1.69
PDGFRAP16234 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFRAP16234 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
PDGFRAP16234 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDGFRAP16234 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.48□□□□□ -1.69
PDGFRAP16234 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.47□□□□□ -1.69
PDGFRAP16234 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFRAP16234 AL592494.2-201ENST00000425455 1548 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFRAP16234 RNA5SP502-201ENST00000362694 119 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 RNU1-87P-201ENST00000363727 170 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 OR6C69P-201ENST00000394268 893 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 HMGB3P19-201ENST00000403971 560 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.47□□□□□ -1.69
PDGFRAP16234 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.47□□□□□ -1.69
PDGFRAP16234 YWHAEP5-201ENST00000431545 765 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.47□□□□□ -1.69
PDGFRAP16234 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.47□□□□□ -1.69
PDGFRAP16234 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.47□□□□□ -1.69
PDGFRAP16234 AC096992.1-201ENST00000459808 709 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AC010618.1-201ENST00000469924 477 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.47□□□□□ -1.69
PDGFRAP16234 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.47□□□□□ -1.69
PDGFRAP16234 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.47□□□□□ -1.69
PDGFRAP16234 AC108145.1-201ENST00000503770 153 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.47□□□□□ -1.69
PDGFRAP16234 RNU5A-7P-201ENST00000515979 116 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AP003355.1-201ENST00000518956 587 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AC138701.1-201ENST00000524329 714 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.47□□□□□ -1.69
PDGFRAP16234 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PDGFRAP16234 MTND6P33-201ENST00000571794 183 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AC069366.1-201ENST00000583159 838 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 RN7SL622P-201ENST00000585292 275 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.47□□□□□ -1.69
PDGFRAP16234 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.47□□□□□ -1.69
PDGFRAP16234 IPO5P1-202ENST00000600039 287 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AC010857.1-201ENST00000606398 594 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AC016542.1-201ENST00000608259 493 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AC078880.5-201ENST00000617845 421 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AC009237.17-201ENST00000618111 748 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AL669942.2-201ENST00000620352 697 ntBASIC4.47□□□□□ -1.69
PDGFRAP16234 AL445363.3-201ENST00000623080 671 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms