Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 GDI2P1-201ENST00000429312 1336 ntBASIC5.47□□□□□ -1.53
COL6A2P12110 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A2P12110 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.47□□□□□ -1.53
COL6A2P12110 GVINP1-202ENST00000531871 7271 ntBASIC5.46□□□□□ -1.53
COL6A2P12110 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL6A2P12110 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL6A2P12110 SOCS5P3-201ENST00000425115 1576 ntBASIC5.46□□□□□ -1.53
COL6A2P12110 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL6A2P12110 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL6A2P12110 AC073136.1-201ENST00000449426 2884 ntBASIC5.46□□□□□ -1.53
COL6A2P12110 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL6A2P12110 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL6A2P12110 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
COL6A2P12110 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL6A2P12110 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL6A2P12110 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.46□□□□□ -1.54
COL6A2P12110 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL6A2P12110 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL6A2P12110 RN7SKP15-201ENST00000364742 309 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 Y_RNA.390-201ENST00000383932 102 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 RNU1-149P-201ENST00000390870 161 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 VN1R8P-201ENST00000407739 893 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 SNORA11B-201ENST00000408175 129 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.46□□□□□ -1.54
COL6A2P12110 NPM1P4-201ENST00000414095 812 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.46□□□□□ -1.54
COL6A2P12110 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.46□□□□□ -1.54
COL6A2P12110 AL356583.2-201ENST00000426536 280 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AL389925.1-201ENST00000432257 728 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 HMGB3P24-201ENST00000433260 622 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 USP9YP12-201ENST00000450481 570 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.46□□□□□ -1.54
COL6A2P12110 AL121769.1-201ENST00000469473 401 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 RN7SL583P-201ENST00000475692 287 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AC074386.1-201ENST00000476560 767 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.46□□□□□ -1.54
COL6A2P12110 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.46□□□□□ -1.54
COL6A2P12110 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
COL6A2P12110 AC108941.1-201ENST00000502853 530 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AC093809.1-201ENST00000509155 340 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 KRT19P6-201ENST00000510983 209 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 SCARNA20.4-201ENST00000516969 131 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AC018442.3-201ENST00000523025 183 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 MTND4LP18-201ENST00000526864 291 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.46□□□□□ -1.54
COL6A2P12110 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.46□□□□□ -1.54
COL6A2P12110 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.46□□□□□ -1.54
COL6A2P12110 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.46□□□□□ -1.54
COL6A2P12110 MIR5697-201ENST00000578045 78 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 MIR4719-201ENST00000585233 84 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.46□□□□□ -1.54
COL6A2P12110 AC009027.1-201ENST00000604510 479 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AC098614.4-201ENST00000607601 462 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.46□□□□□ -1.54
COL6A2P12110 AL365181.4-201ENST00000609800 547 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AC103710.1-201ENST00000610003 901 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AL359535.1-201ENST00000612100 1087 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AC243654.2-201ENST00000612843 443 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AC243773.3-201ENST00000613270 256 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.46□□□□□ -1.54
COL6A2P12110 AC124864.2-201ENST00000624736 186 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
COL6A2P12110 AC073869.8-201ENST00000641806 335 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
COL6A2P12110 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL6A2P12110 AC134882.1-201ENST00000603738 1676 ntBASIC5.46□□□□□ -1.54
COL6A2P12110 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
COL6A2P12110 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.46□□□□□ -1.54
COL6A2P12110 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
COL6A2P12110 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.46□□□□□ -1.54
COL6A2P12110 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL6A2P12110 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.46□□□□□ -1.54
COL6A2P12110 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.45□□□□□ -1.54
COL6A2P12110 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL6A2P12110 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL6A2P12110 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
COL6A2P12110 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.45□□□□□ -1.54
COL6A2P12110 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
COL6A2P12110 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.45□□□□□ -1.54
COL6A2P12110 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
COL6A2P12110 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL6A2P12110 RNA5SP435-201ENST00000364044 108 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 RNA5SP131-201ENST00000365452 119 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.45□□□□□ -1.54
COL6A2P12110 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.45□□□□□ -1.54
COL6A2P12110 RPSAP35-201ENST00000413753 818 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.45□□□□□ -1.54
COL6A2P12110 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.45□□□□□ -1.54
COL6A2P12110 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.45□□□□□ -1.54
COL6A2P12110 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.45□□□□□ -1.54
COL6A2P12110 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.45□□□□□ -1.54
COL6A2P12110 AC092427.1-201ENST00000439177 601 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.45□□□□□ -1.54
COL6A2P12110 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.45□□□□□ -1.54
COL6A2P12110 MTATP6P30-201ENST00000443540 664 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 HMGN1P2-201ENST00000445197 310 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 AC090804.1-201ENST00000448870 490 ntBASIC5.45□□□□□ -1.54
COL6A2P12110 PSPHP1-201ENST00000450062 261 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms