Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL157392.4-201ENST00000609756 345 ntBASIC4.48□□□□□ -1.69
COL2A1P02458 AP000255.1-201ENST00000610276 676 ntBASIC4.48□□□□□ -1.69
COL2A1P02458 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.48□□□□□ -1.69
COL2A1P02458 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.48□□□□□ -1.69
COL2A1P02458 UBE3AP2-201ENST00000429033 2259 ntBASIC4.48□□□□□ -1.69
COL2A1P02458 ZNF833P-201ENST00000424938 1494 ntBASIC4.48□□□□□ -1.69
COL2A1P02458 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
COL2A1P02458 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL2A1P02458 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.47□□□□□ -1.69
COL2A1P02458 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL2A1P02458 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL2A1P02458 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.47□□□□□ -1.69
COL2A1P02458 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.47□□□□□ -1.69
COL2A1P02458 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL2A1P02458 SNORD3H-201ENST00000384486 214 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.47□□□□□ -1.69
COL2A1P02458 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.47□□□□□ -1.69
COL2A1P02458 OR2X1P-201ENST00000421144 687 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 AL590609.2-201ENST00000421430 368 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.47□□□□□ -1.69
COL2A1P02458 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.47□□□□□ -1.69
COL2A1P02458 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.47□□□□□ -1.69
COL2A1P02458 XKRYP6-201ENST00000440468 1116 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 XKRYP3-201ENST00000442113 1116 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.47□□□□□ -1.69
COL2A1P02458 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.47□□□□□ -1.69
COL2A1P02458 FCF1P6-201ENST00000456841 595 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 AL049873.1-201ENST00000480540 376 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 AC093801.2-201ENST00000503966 1050 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 HMGN1P11-201ENST00000508668 303 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 AC104619.4-201ENST00000510773 249 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.47□□□□□ -1.69
COL2A1P02458 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.47□□□□□ -1.69
COL2A1P02458 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.47□□□□□ -1.69
COL2A1P02458 AC244505.7-201ENST00000599675 272 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 AC146944.4-201ENST00000602697 718 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 AC093783.1-201ENST00000612976 329 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 AL591424.2-201ENST00000617023 128 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 AC010608.3-201ENST00000625048 527 ntBASIC4.47□□□□□ -1.69
COL2A1P02458 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COL2A1P02458 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL2A1P02458 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.46□□□□□ -1.69
COL2A1P02458 AC011266.1-201ENST00000624119 3569 ntBASIC4.46□□□□□ -1.69
COL2A1P02458 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
COL2A1P02458 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COL2A1P02458 AC120036.2-201ENST00000509729 1474 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COL2A1P02458 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.46□□□□□ -1.7
COL2A1P02458 RNU6-316P-201ENST00000391027 107 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COL2A1P02458 SETP9-201ENST00000423837 832 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 KCTD9P3-201ENST00000434597 1169 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 VN1R25P-201ENST00000443385 738 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.46□□□□□ -1.7
COL2A1P02458 VN1R40P-201ENST00000455196 941 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.46□□□□□ -1.7
COL2A1P02458 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.46□□□□□ -1.7
COL2A1P02458 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.46□□□□□ -1.7
COL2A1P02458 RANP9-201ENST00000519957 271 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL2A1P02458 AC090136.1-201ENST00000520009 240 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 AC022695.1-201ENST00000522089 237 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.46□□□□□ -1.7
COL2A1P02458 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.46□□□□□ -1.7
COL2A1P02458 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.46□□□□□ -1.7
COL2A1P02458 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.46□□□□□ -1.7
COL2A1P02458 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.46□□□□□ -1.7
COL2A1P02458 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.46□□□□□ -1.7
COL2A1P02458 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.46□□□□□ -1.7
COL2A1P02458 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
COL2A1P02458 BNIP3P31-201ENST00000604515 566 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.46□□□□□ -1.7
COL2A1P02458 AC092354.2-201ENST00000607786 514 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 OR7M1P-201ENST00000608946 533 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 AC140725.3-201ENST00000616193 880 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 AC091046.2-201ENST00000620775 665 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 AC006249.1-201ENST00000621223 471 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.46□□□□□ -1.7
COL2A1P02458 ATE1-AS1-202ENST00000636460 506 ntBASIC4.46□□□□□ -1.7
COL2A1P02458 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL2A1P02458 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.46□□□□□ -1.7
COL2A1P02458 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL2A1P02458 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
COL2A1P02458 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL2A1P02458 MTCO1P12-201ENST00000414273 1543 ntBASIC4.45□□□□□ -1.7
COL2A1P02458 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
COL2A1P02458 AL035423.1-201ENST00000420331 213 ntBASIC4.45□□□□□ -1.7
COL2A1P02458 AC073387.1-201ENST00000453261 709 ntBASIC4.45□□□□□ -1.7
COL2A1P02458 GTF2IP9-201ENST00000502460 301 ntBASIC4.45□□□□□ -1.7
COL2A1P02458 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.45□□□□□ -1.7
COL2A1P02458 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.45□□□□□ -1.7
COL2A1P02458 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.45□□□□□ -1.7
COL2A1P02458 MTND2P38-201ENST00000522536 667 ntBASIC4.45□□□□□ -1.7
COL2A1P02458 CR383656.14-201ENST00000551951 406 ntBASIC4.45□□□□□ -1.7
COL2A1P02458 AC090877.1-201ENST00000561418 344 ntBASIC4.45□□□□□ -1.7
COL2A1P02458 AC005951.1-201ENST00000576706 485 ntBASIC4.45□□□□□ -1.7
COL2A1P02458 OR7A8P-201ENST00000595427 913 ntBASIC4.45□□□□□ -1.7
COL2A1P02458 ELOCP35-201ENST00000604289 336 ntBASIC4.45□□□□□ -1.7
COL2A1P02458 AC128687.2-201ENST00000609657 566 ntBASIC4.45□□□□□ -1.7
COL2A1P02458 AC006963.1-201ENST00000624003 1052 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms