Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMX1BO60663 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMX1BO60663 RN7SKP100-201ENST00000411258 284 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC013404.1-201ENST00000413068 249 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.11□□□□□ -1.75
LMX1BO60663 LINC00993-201ENST00000420453 540 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
LMX1BO60663 OR2B7P-201ENST00000429302 934 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 MTCO1P52-201ENST00000433928 531 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 KCTD10P1-201ENST00000434203 625 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.11□□□□□ -1.75
LMX1BO60663 MTND1P34-201ENST00000438556 671 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 YWHAZP2-201ENST00000440317 728 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.11□□□□□ -1.75
LMX1BO60663 AC002553.2-201ENST00000453217 340 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC108734.3-201ENST00000481241 1165 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC069528.1-202ENST00000482888 637 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.11□□□□□ -1.75
LMX1BO60663 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC084024.2-201ENST00000503480 791 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LMX1BO60663 RPF2P2-201ENST00000504693 896 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.11□□□□□ -1.75
LMX1BO60663 AC111000.3-201ENST00000508057 576 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC091868.1-201ENST00000508746 304 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC113347.3-201ENST00000509113 148 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 NDUFB4P12-201ENST00000513465 390 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 RNU6-1004P-201ENST00000516584 111 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 snoZ278.1-201ENST00000517059 112 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.11□□□□□ -1.75
LMX1BO60663 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.11□□□□□ -1.75
LMX1BO60663 AP001880.2-201ENST00000538233 448 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.11□□□□□ -1.75
LMX1BO60663 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.11□□□□□ -1.75
LMX1BO60663 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.11□□□□□ -1.75
LMX1BO60663 NBEAP1-201ENST00000554452 979 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.11□□□□□ -1.75
LMX1BO60663 ATP5J2P6-201ENST00000565203 266 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.11□□□□□ -1.75
LMX1BO60663 AC136624.4-201ENST00000573044 370 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.11□□□□□ -1.75
LMX1BO60663 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.11□□□□□ -1.75
LMX1BO60663 AL020997.2-201ENST00000602607 184 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.11□□□□□ -1.75
LMX1BO60663 AL157770.1-201ENST00000623049 439 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC079248.2-201ENST00000623779 326 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 AC021106.3-201ENST00000623925 531 ntBASIC4.11□□□□□ -1.75
LMX1BO60663 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LMX1BO60663 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LMX1BO60663 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LMX1BO60663 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.11□□□□□ -1.75
LMX1BO60663 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LMX1BO60663 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LMX1BO60663 AL121950.1-201ENST00000624993 2077 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
LMX1BO60663 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.1□□□□□ -1.75
LMX1BO60663 MAPK10-349ENST00000641767 3661 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.1□□□□□ -1.75
LMX1BO60663 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.1□□□□□ -1.75
LMX1BO60663 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
LMX1BO60663 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LMX1BO60663 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.1□□□□□ -1.75
LMX1BO60663 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.1□□□□□ -1.75
LMX1BO60663 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LMX1BO60663 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LMX1BO60663 snoZ40.1-201ENST00000364540 72 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LMX1BO60663 GSTA8P-201ENST00000404253 637 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.1□□□□□ -1.75
LMX1BO60663 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.1□□□□□ -1.75
LMX1BO60663 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.1□□□□□ -1.75
LMX1BO60663 AC004074.1-201ENST00000421810 1063 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.1□□□□□ -1.75
LMX1BO60663 USP9YP14-201ENST00000430663 563 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.1□□□□□ -1.75
LMX1BO60663 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.1□□□□□ -1.75
LMX1BO60663 NPM1P13-201ENST00000452663 865 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 RPL31P3-201ENST00000458430 332 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 CCDC75P1-201ENST00000469247 791 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 AC098583.1-201ENST00000480875 255 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 AC026979.1-201ENST00000492525 396 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.1□□□□□ -1.75
LMX1BO60663 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.1□□□□□ -1.75
LMX1BO60663 AK3P4-201ENST00000504283 583 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LMX1BO60663 RNU6-759P-201ENST00000516740 103 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LMX1BO60663 AC133555.2-201ENST00000550213 292 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LMX1BO60663 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.1□□□□□ -1.75
LMX1BO60663 AC087465.1-201ENST00000560574 245 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 AC095057.3-201ENST00000567102 1157 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 RN7SL802P-201ENST00000577858 299 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 MIR5699-201ENST00000578903 90 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LMX1BO60663 AC022726.1-201ENST00000587475 207 ntBASIC4.1□□□□□ -1.75
LMX1BO60663 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.1□□□□□ -1.75
LMX1BO60663 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms