Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.28□□□□□ -1.72
TO15178 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.28□□□□□ -1.72
TO15178 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.28□□□□□ -1.72
TO15178 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.28□□□□□ -1.72
TO15178 AC044913.1-201ENST00000557200 430 ntBASIC4.28□□□□□ -1.72
TO15178 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.28□□□□□ -1.72
TO15178 AC015912.2-201ENST00000571053 181 ntBASIC4.28□□□□□ -1.72
TO15178 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.28□□□□□ -1.72
TO15178 BNIP3P32-201ENST00000600015 554 ntBASIC4.28□□□□□ -1.72
TO15178 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.28□□□□□ -1.72
TO15178 AC010680.4-201ENST00000605334 543 ntBASIC4.28□□□□□ -1.72
TO15178 AC106052.1-201ENST00000608029 497 ntBASIC4.28□□□□□ -1.72
TO15178 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.28□□□□□ -1.72
TO15178 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.28□□□□□ -1.72
TO15178 ZNF663P-202ENST00000641770 1131 ntBASIC4.28□□□□□ -1.72
TO15178 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
TO15178 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TO15178 AC025125.1-201ENST00000624743 1922 ntBASIC4.28□□□□□ -1.72
TO15178 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TO15178 AC092435.4-201ENST00000623012 4159 ntBASIC4.28□□□□□ -1.73
TO15178 AL133412.1-201ENST00000380194 2992 ntBASIC4.27□□□□□ -1.73
TO15178 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TO15178 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TO15178 AC108751.5-201ENST00000492880 1336 ntBASIC4.27□□□□□ -1.73
TO15178 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TO15178 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TO15178 MIR921-201ENST00000401133 56 ntBASIC4.27□□□□□ -1.73
TO15178 AL049697.2-201ENST00000403708 294 ntBASIC4.27□□□□□ -1.73
TO15178 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.27□□□□□ -1.73
TO15178 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.27□□□□□ -1.73
TO15178 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TO15178 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TO15178 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TO15178 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TO15178 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.27□□□□□ -1.73
TO15178 RPF2P1-201ENST00000424137 906 ntBASIC4.27□□□□□ -1.73
TO15178 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.27□□□□□ -1.73
TO15178 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.27□□□□□ -1.73
TO15178 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.27□□□□□ -1.73
TO15178 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.27□□□□□ -1.73
TO15178 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TO15178 AC004865.1-201ENST00000442276 1003 ntBASIC4.27□□□□□ -1.73
TO15178 EIF2S2P2-201ENST00000447161 982 ntBASIC4.27□□□□□ -1.73
TO15178 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.27□□□□□ -1.73
TO15178 ZNF886P-201ENST00000450781 723 ntBASIC4.27□□□□□ -1.73
TO15178 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.27□□□□□ -1.73
TO15178 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.27□□□□□ -1.73
TO15178 AC104763.1-201ENST00000475274 360 ntBASIC4.27□□□□□ -1.73
TO15178 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.27□□□□□ -1.73
TO15178 MTATP6P22-201ENST00000507369 598 ntBASIC4.27□□□□□ -1.73
TO15178 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.27□□□□□ -1.73
TO15178 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.27□□□□□ -1.73
TO15178 RPL7L1P13-201ENST00000511702 739 ntBASIC4.27□□□□□ -1.73
TO15178 AC023632.1-201ENST00000518463 375 ntBASIC4.27□□□□□ -1.73
TO15178 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.27□□□□□ -1.73
TO15178 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.27□□□□□ -1.73
TO15178 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.27□□□□□ -1.73
TO15178 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.27□□□□□ -1.73
TO15178 MIR4666A-201ENST00000580160 79 ntBASIC4.27□□□□□ -1.73
TO15178 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TO15178 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.27□□□□□ -1.73
TO15178 AC091488.1-201ENST00000604239 660 ntBASIC4.27□□□□□ -1.73
TO15178 IMMP1LP1-201ENST00000605170 488 ntBASIC4.27□□□□□ -1.73
TO15178 AC013244.3-201ENST00000605614 388 ntBASIC4.27□□□□□ -1.73
TO15178 COX6CP4-201ENST00000605798 228 ntBASIC4.27□□□□□ -1.73
TO15178 AP004247.3-201ENST00000608682 624 ntBASIC4.27□□□□□ -1.73
TO15178 AC009237.15-201ENST00000610252 501 ntBASIC4.27□□□□□ -1.73
TO15178 AL138478.1-201ENST00000612252 832 ntBASIC4.27□□□□□ -1.73
TO15178 uc_338.18-201ENST00000615451 175 ntBASIC4.27□□□□□ -1.73
TO15178 SNX18P1Y-201ENST00000616231 511 ntBASIC4.27□□□□□ -1.73
TO15178 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TO15178 AC008993.2-201ENST00000631744 806 ntBASIC4.27□□□□□ -1.73
TO15178 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.27□□□□□ -1.73
TO15178 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TO15178 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TO15178 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.27□□□□□ -1.73
TO15178 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TO15178 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TO15178 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
TO15178 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TO15178 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TO15178 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TO15178 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TO15178 AC012020.1-201ENST00000624541 1728 ntBASIC4.26□□□□□ -1.73
TO15178 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.26□□□□□ -1.73
TO15178 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.26□□□□□ -1.73
TO15178 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.26□□□□□ -1.73
TO15178 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TO15178 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.26□□□□□ -1.73
TO15178 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TO15178 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TO15178 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TO15178 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TO15178 SNORA71.2-201ENST00000364941 134 ntBASIC4.26□□□□□ -1.73
TO15178 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms