Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RFXAPO00287 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.68□□□□□ -1.5
RFXAPO00287 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RFXAPO00287 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFXAPO00287 OR4K15-201ENST00000305051 1216 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 AC079741.1-201ENST00000321498 212 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.68□□□□□ -1.5
RFXAPO00287 MIR1302-11-201ENST00000408051 138 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 MIR1302-9-201ENST00000408365 138 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 MIR1302-10-201ENST00000408734 138 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 LINC01347-201ENST00000417964 355 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 SDCBPP3-201ENST00000419629 891 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.68□□□□□ -1.5
RFXAPO00287 ZYG11AP1-201ENST00000430329 837 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.68□□□□□ -1.5
RFXAPO00287 AL365184.2-201ENST00000431139 435 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.68□□□□□ -1.5
RFXAPO00287 AL035458.1-201ENST00000433096 585 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 RPS26P30-201ENST00000443431 335 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.68□□□□□ -1.5
RFXAPO00287 MTCO2P25-201ENST00000447065 681 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 HMGB1P16-201ENST00000447155 540 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.68□□□□□ -1.5
RFXAPO00287 PMCHL2-203ENST00000457791 237 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
RFXAPO00287 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.68□□□□□ -1.5
RFXAPO00287 AC019235.1-201ENST00000503847 207 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFXAPO00287 AC018710.1-201ENST00000506509 158 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 TOMM22P4-201ENST00000511318 336 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.68□□□□□ -1.5
RFXAPO00287 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.68□□□□□ -1.5
RFXAPO00287 YWHABP2-201ENST00000540201 713 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 AL121594.2-201ENST00000541658 472 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 NPM1P5-201ENST00000557228 838 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.68□□□□□ -1.5
RFXAPO00287 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
RFXAPO00287 KC877982.1-201ENST00000602313 470 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 AL161729.3-201ENST00000603533 673 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 MIR1302-2-201ENST00000607096 138 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 AC024560.3-201ENST00000608482 349 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 AL592494.3-201ENST00000609485 464 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFXAPO00287 AC015722.2-201ENST00000622210 551 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 AC011815.3-201ENST00000624194 473 ntBASIC5.68□□□□□ -1.5
RFXAPO00287 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.68□□□□□ -1.5
RFXAPO00287 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.68□□□□□ -1.5
RFXAPO00287 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RFXAPO00287 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFXAPO00287 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.68□□□□□ -1.5
RFXAPO00287 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RFXAPO00287 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFXAPO00287 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFXAPO00287 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFXAPO00287 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFXAPO00287 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.68□□□□□ -1.5
RFXAPO00287 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RFXAPO00287 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.68□□□□□ -1.5
RFXAPO00287 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFXAPO00287 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFXAPO00287 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFXAPO00287 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.67□□□□□ -1.5
RFXAPO00287 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.67□□□□□ -1.5
RFXAPO00287 AC135352.1-201ENST00000506173 1418 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 AL645937.1-201ENST00000641739 1652 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 AL137141.1-201ENST00000624622 4836 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFXAPO00287 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RFXAPO00287 Y_RNA.89-201ENST00000363031 102 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 RNU5F-7P-201ENST00000363696 115 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RFXAPO00287 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.67□□□□□ -1.5
RFXAPO00287 MIR23A-201ENST00000385245 73 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RFXAPO00287 ATP5HP3-201ENST00000396994 486 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 AL121977.1-201ENST00000401636 979 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 RNU2-50P-201ENST00000410494 143 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.67□□□□□ -1.5
RFXAPO00287 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.67□□□□□ -1.5
RFXAPO00287 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.67□□□□□ -1.5
RFXAPO00287 RPS17P17-201ENST00000419392 409 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 AC069213.2-201ENST00000420238 366 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.67□□□□□ -1.5
RFXAPO00287 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.67□□□□□ -1.5
RFXAPO00287 AC007742.1-201ENST00000425789 329 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.67□□□□□ -1.5
RFXAPO00287 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.67□□□□□ -1.5
RFXAPO00287 HMGB1P45-201ENST00000435986 653 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 ELOCP26-201ENST00000436067 329 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.67□□□□□ -1.5
RFXAPO00287 RPL7P31-201ENST00000450192 724 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 AC063943.1-201ENST00000465434 453 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 RPS23P7-201ENST00000466210 444 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFXAPO00287 AC079080.1-201ENST00000479841 822 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 HMGN2P25-201ENST00000486956 268 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.67□□□□□ -1.5
RFXAPO00287 AC093815.1-201ENST00000508637 280 ntBASIC5.67□□□□□ -1.5
RFXAPO00287 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.67□□□□□ -1.5
RFXAPO00287 Y_RNA.704-201ENST00000516851 102 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 292.9 ms