Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC188H7C350 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.4□□□□□ -1.71
CCDC188H7C350 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CCDC188H7C350 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC188H7C350 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC188H7C350 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CCDC188H7C350 ASNSP1-204ENST00000641977 1664 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC188H7C350 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CCDC188H7C350 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC188H7C350 AL592437.2-201ENST00000421655 2434 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC188H7C350 AC016716.1-201ENST00000265882 708 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 RNU1-87P-201ENST00000363727 170 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 RNA5SP513-201ENST00000364648 118 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 RNU6-932P-201ENST00000391108 106 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AL035405.1-201ENST00000400795 710 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AL109941.1-201ENST00000401925 229 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 PRRC2CP1-201ENST00000404428 159 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 ZNF603P-201ENST00000405613 487 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AL355143.1-201ENST00000407101 841 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AC004987.3-201ENST00000413879 771 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC188H7C350 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC188H7C350 TAF13P2-201ENST00000416876 286 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC188H7C350 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC188H7C350 UQCRBP1-201ENST00000421129 336 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 GAPDHP49-201ENST00000421421 961 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 RPL7AP25-201ENST00000423357 805 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AC234779.1-201ENST00000425910 285 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 NIPA2P1-201ENST00000426223 976 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 MTCO1P54-201ENST00000430139 712 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC188H7C350 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC188H7C350 AL772161.1-201ENST00000439130 476 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 MTND1P33-201ENST00000446251 917 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC188H7C350 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC188H7C350 Z95152.1-201ENST00000453556 656 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC188H7C350 RPL7P32-201ENST00000457119 744 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AC091959.2-201ENST00000477363 321 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AC015724.1-201ENST00000478577 156 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC188H7C350 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC188H7C350 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC188H7C350 AC112198.4-201ENST00000515450 351 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 RNA5SP73-201ENST00000516744 108 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC188H7C350 IGJP1-201ENST00000522682 475 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC188H7C350 AP000676.2-201ENST00000529711 301 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 PTP4A1P6-201ENST00000531034 478 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC188H7C350 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC188H7C350 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC188H7C350 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC188H7C350 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC188H7C350 AL445222.1-201ENST00000607259 628 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AP003392.5-201ENST00000607857 415 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AC005156.1-201ENST00000613371 573 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AC090510.2-201ENST00000617465 629 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 uc_338.13-201ENST00000618243 179 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC188H7C350 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC188H7C350 AP005019.3-201ENST00000620418 560 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AL359715.5-201ENST00000623431 443 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AL356121.2-201ENST00000624715 780 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AL049536.1-201ENST00000625043 744 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 AC008013.2-202ENST00000637965 364 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC188H7C350 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC188H7C350 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC188H7C350 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC188H7C350 AC018529.3-201ENST00000624212 2254 ntBASIC4.39□□□□□ -1.71
CCDC188H7C350 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC188H7C350 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC188H7C350 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC188H7C350 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC188H7C350 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC188H7C350 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC188H7C350 BDP1P-201ENST00000582658 1990 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 MAPK10-373ENST00000641983 6772 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC188H7C350 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC188H7C350 OR5P1P-201ENST00000299512 925 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC188H7C350 RNU5B-4P-201ENST00000363508 111 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC188H7C350 SNORA70F-201ENST00000384142 135 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC188H7C350 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC188H7C350 VDAC1P6-201ENST00000430062 855 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 ATP5HP2-201ENST00000433885 485 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 AC008072.1-201ENST00000434254 824 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 AL359265.2-201ENST00000434367 631 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 AL356535.1-201ENST00000440335 398 ntBASIC4.38□□□□□ -1.71
CCDC188H7C350 AL512326.1-201ENST00000443050 721 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms