Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AP002360.3-201ENST00000607673 710 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 OR2BH1P-201ENST00000608850 864 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 ZYXP1-201ENST00000617638 118 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC100871.1-201ENST00000507871 1456 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC008725.1-201ENST00000605123 2263 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AL136964.1-201ENST00000622038 2990 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AL158163.1-201ENST00000603915 1649 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 MTCO1P14-201ENST00000441695 1559 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 XIAPP3-201ENST00000312918 795 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 RNA5SP307-201ENST00000362863 116 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 RNU1-20P-201ENST00000363314 162 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 Y_RNA.126-201ENST00000363382 111 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 OR52E6-202ENST00000379946 954 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 SNORA11F-201ENST00000408237 128 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 SNORA11-201ENST00000408789 128 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 RPL23AP52-201ENST00000439311 478 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 RPS7P5-201ENST00000441482 581 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 RPS27AP15-201ENST00000447672 466 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 RPL7P55-201ENST00000450522 746 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AC096992.1-201ENST00000459808 709 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AC041039.1-201ENST00000485656 536 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 IGLVIV-53-201ENST00000520107 367 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AC090151.1-201ENST00000520784 730 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AP003730.1-201ENST00000524605 285 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AC104229.1-201ENST00000561364 255 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 NTAN1P1-201ENST00000603150 646 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AC079587.1-201ENST00000603846 277 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AC067959.1-201ENST00000604334 379 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AC115621.1-201ENST00000604653 858 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AL392112.1-201ENST00000605115 829 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 Z98200.1-201ENST00000607298 470 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AC140479.6-201ENST00000633535 357 ntBASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NPIPA2E9PIF3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC095050.2-201ENST00000510748 1458 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC017007.4-201ENST00000503353 1352 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 RNA5SP515-201ENST00000364570 118 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 RNA5SP513-201ENST00000364648 118 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 RNA5SP151-201ENST00000365632 117 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 RNU6-481P-201ENST00000384194 107 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 NRBF2P2-201ENST00000413087 861 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AL139095.3-201ENST00000419672 1203 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 UBE2D3P3-201ENST00000426992 425 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 CDY14P-201ENST00000431260 1014 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AP000949.1-201ENST00000438328 629 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 UBE2V1P3-201ENST00000439651 417 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 CDY12P-201ENST00000440679 1015 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 CDY13P-201ENST00000445813 1015 ntBASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.94□□□□□ -1.78
NPIPA2E9PIF3 AC104306.1-201ENST00000449702 371 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms