Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 NXPH1-205ENST00000602349 1953 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC092162.3-201ENST00000624511 1624 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC134882.1-201ENST00000603738 1676 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 MIR659-201ENST00000384963 97 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 RNA5SP80-201ENST00000410475 111 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 GSTM3P2-201ENST00000412746 530 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 NRBF2P2-201ENST00000413087 861 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC234782.4-201ENST00000417646 1048 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 MRPS36P1-201ENST00000421291 307 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 SEPT7P5-201ENST00000434048 306 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 YWHAZP7-201ENST00000436906 631 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC092393.1-201ENST00000439625 742 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 COX6CP18-201ENST00000448769 222 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 RN7SL177P-201ENST00000476596 299 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 OR5H4P-201ENST00000510851 923 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC079395.1-201ENST00000510981 262 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 OR7H2P-201ENST00000513483 306 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC090151.1-201ENST00000520784 730 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC115085.1-201ENST00000588924 229 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 HMGB2P1-201ENST00000591146 634 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AL109653.1-201ENST00000603091 248 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AL512782.1-201ENST00000603093 364 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 Z99497.2-201ENST00000603634 310 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 Z94722.1-201ENST00000604328 474 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC010200.2-201ENST00000605098 235 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC080013.6-201ENST00000606185 215 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC064807.4-201ENST00000607201 407 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC018445.2-201ENST00000622987 260 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AC091905.2-201ENST00000623143 306 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 DCAF13P3-201ENST00000561147 1334 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 DBF4P1-201ENST00000412976 1892 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 RARSP1-201ENST00000542842 1418 ntBASIC4.62□□□□□ -1.67
TCRBV7S3A2A0A539 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 BX510359.2-201ENST00000417920 305 ntBASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 AC090960.1-201ENST00000421072 306 ntBASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 RAD23BP1-201ENST00000421404 1227 ntBASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 MTND4P20-201ENST00000424125 869 ntBASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 ATP5F1P1-201ENST00000433775 569 ntBASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 AC016831.4-201ENST00000438302 307 ntBASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 AC093155.1-201ENST00000440164 826 ntBASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 AC243772.1-201ENST00000451620 410 ntBASIC4.61□□□□□ -1.67
TCRBV7S3A2A0A539 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms