Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AC245052.5-201ENST00000416320 649 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 PRELID3BP7-201ENST00000503606 469 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 OR4A12P-201ENST00000530847 918 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AC244258.1-201ENST00000637553 1071 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 HSPD1P21-201ENST00000436541 245 ntBASIC3.52□□□□□ -1.85
CCDC88CQ9P219 AP000563.1-201ENST00000490865 758 ntBASIC3.52□□□□□ -1.85
CCDC88CQ9P219 AC074250.1-201ENST00000511117 192 ntBASIC3.52□□□□□ -1.85
CCDC88CQ9P219 RNA5SP208-201ENST00000516156 78 ntBASIC3.52□□□□□ -1.85
CCDC88CQ9P219 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 AC024220.1-201ENST00000603675 484 ntBASIC3.52□□□□□ -1.85
CCDC88CQ9P219 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.52□□□□□ -1.85
CCDC88CQ9P219 AL355365.1-201ENST00000616480 294 ntBASIC3.52□□□□□ -1.85
CCDC88CQ9P219 AC009093.8-201ENST00000641769 292 ntBASIC3.52□□□□□ -1.85
CCDC88CQ9P219 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.52□□□□□ -1.85
CCDC88CQ9P219 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC88CQ9P219 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 ATP5F1P4-201ENST00000397288 746 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 RPL7P60-201ENST00000397636 735 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 Z98941.1-201ENST00000407764 100 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 KRR1P1-201ENST00000419430 803 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 AL158071.1-201ENST00000430315 461 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 PPIAP3-201ENST00000450588 505 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 RPS4XP2-201ENST00000458402 793 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 AC021733.2-201ENST00000518830 497 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 RNU6-761P-201ENST00000384148 107 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 RNU1-89P-201ENST00000384592 164 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 AC007066.1-201ENST00000392902 381 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 SNORA70.18-201ENST00000516696 98 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 AC023161.2-201ENST00000551218 780 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 HMGB3P26-201ENST00000560051 582 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 BNIP3P22-201ENST00000593399 556 ntBASIC3.51□□□□□ -1.85
CCDC88CQ9P219 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC88CQ9P219 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
CCDC88CQ9P219 AC107027.3-201ENST00000565095 3473 ntBASIC3.5□□□□□ -1.85
CCDC88CQ9P219 CR381670.1-201ENST00000624291 1693 ntBASIC3.5□□□□□ -1.85
CCDC88CQ9P219 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC88CQ9P219 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC88CQ9P219 SNORD9-201ENST00000362566 104 ntBASIC3.5□□□□□ -1.85
CCDC88CQ9P219 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC88CQ9P219 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CCDC88CQ9P219 RPL7P49-201ENST00000471402 708 ntBASIC3.5□□□□□ -1.85
CCDC88CQ9P219 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC88CQ9P219 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC88CQ9P219 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC88CQ9P219 RPS27AP18-201ENST00000515536 459 ntBASIC3.5□□□□□ -1.85
CCDC88CQ9P219 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC88CQ9P219 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC88CQ9P219 AC025946.2-201ENST00000603398 234 ntBASIC3.5□□□□□ -1.85
CCDC88CQ9P219 U3.45-201ENST00000607547 219 ntBASIC3.5□□□□□ -1.85
CCDC88CQ9P219 U4.6-201ENST00000621618 127 ntBASIC3.5□□□□□ -1.85
CCDC88CQ9P219 AL392088.2-201ENST00000637607 285 ntBASIC3.5□□□□□ -1.85
CCDC88CQ9P219 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC88CQ9P219 AL031985.3-201ENST00000565390 2449 ntBASIC3.5□□□□□ -1.85
CCDC88CQ9P219 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC88CQ9P219 LINC00561-201ENST00000565815 2738 ntBASIC3.5□□□□□ -1.85
CCDC88CQ9P219 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC88CQ9P219 AC093311.1-201ENST00000506586 2021 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms