Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL121877.1-201ENST00000453704 622 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AL133477.1-201ENST00000457472 514 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 VWA8P1-201ENST00000510889 176 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 SRGNP1-201ENST00000603392 451 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 MIR3651-201ENST00000630427 90 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 U6.105-201ENST00000637379 88 ntBASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KIAA1549Q9HCM3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 JKAMPP1-201ENST00000413804 919 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 PTP4A1P1-201ENST00000420539 515 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 AC092647.1-201ENST00000420654 287 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 AL591419.1-201ENST00000427423 339 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 RPL7P28-201ENST00000437739 740 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 AL133162.1-201ENST00000463228 453 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 PLGLA-201ENST00000465668 449 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 AC107015.1-201ENST00000466902 747 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 AC007458.1-201ENST00000542812 373 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 SNORA62.6-201ENST00000606322 83 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 AL391261.4-201ENST00000616012 481 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 AL031985.3-201ENST00000565390 2449 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 AC104978.1-201ENST00000449387 391 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 RPL21P11-201ENST00000461458 483 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 RPS4XP10-201ENST00000465034 731 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 AC074250.1-201ENST00000511117 192 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 U3.45-201ENST00000607547 219 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 AC026368.1-201ENST00000614934 690 ntBASIC3.31□□□□□ -1.88
KIAA1549Q9HCM3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 RNA5SP502-201ENST00000362694 119 ntBASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 RNA5SP322-201ENST00000363617 119 ntBASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 OR6K3-202ENST00000368146 996 ntBASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 MIR183-201ENST00000384958 110 ntBASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 U3.39-201ENST00000408569 239 ntBASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 RAC1P3-201ENST00000416129 580 ntBASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 MTND2P11-201ENST00000423638 648 ntBASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 AP000907.1-201ENST00000428428 510 ntBASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 DEFB109D-201ENST00000529497 240 ntBASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 AC006946.3-201ENST00000609791 756 ntBASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 AC243654.2-201ENST00000612843 443 ntBASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 AC015908.5-201ENST00000623289 343 ntBASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
KIAA1549Q9HCM3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 MIR200C-201ENST00000384980 68 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AC017079.2-201ENST00000416102 485 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AL050321.1-201ENST00000432363 400 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 RN7SL293P-201ENST00000481765 281 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 OR9N1P-201ENST00000491296 333 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AC005726.1-201ENST00000494679 427 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AC110768.1-201ENST00000509222 400 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AC018555.1-201ENST00000567548 1980 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AL392088.2-201ENST00000637607 285 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AP000553.6-201ENST00000641242 118 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AC107027.3-201ENST00000565095 3473 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms