Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 Y_RNA.554-201ENST00000384672 102 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 RNU11-201ENST00000387069 134 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 RNA5SP241-201ENST00000391326 114 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AL078599.1-201ENST00000402075 293 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AC002524.1-201ENST00000411687 547 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AL109913.1-201ENST00000421173 514 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AL360081.1-201ENST00000428299 555 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 HMGB1P45-201ENST00000435986 653 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AC092427.1-201ENST00000439177 601 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 ARL5AP2-201ENST00000444698 533 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 RN7SL189P-201ENST00000468631 289 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AL121769.1-201ENST00000469473 401 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AC105252.1-201ENST00000503089 286 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 OR7H2P-201ENST00000513483 306 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 IGHV3-63-201ENST00000518422 341 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 MIR7853-201ENST00000584820 132 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AL360012.1-201ENST00000602813 131 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 RNU4-89P-201ENST00000607443 133 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 EIF3FP1-201ENST00000613970 806 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AC006338.1-201ENST00000618453 749 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AC073348.1-201ENST00000623002 331 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AC004009.2-201ENST00000623016 728 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 AC004817.4-201ENST00000602396 3625 ntBASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.77□□□□□ -1.49
BCAS3Q9H6U6 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 OR1L6-202ENST00000373684 1044 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 RNU1-74P-201ENST00000384108 171 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 RNU5A-6P-201ENST00000384136 116 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 RNU6-452P-201ENST00000384406 107 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 RPL12P9-201ENST00000412942 488 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 CHEK2P3-201ENST00000416118 248 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AL512649.1-201ENST00000428997 581 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 RPL31P54-201ENST00000429803 370 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 USP12PX-201ENST00000432383 1057 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 SEPT7P5-201ENST00000434048 306 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 HMGB1P31-201ENST00000437242 427 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 MTND3P10-201ENST00000450967 341 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AC083982.1-201ENST00000485679 344 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 DYNLL1P6-201ENST00000503440 264 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 FAM92A1P2-202ENST00000504766 877 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 RNA5SP43-201ENST00000516559 110 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 IGJP1-201ENST00000522682 475 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AC020914.6-201ENST00000594327 272 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AC133552.5-201ENST00000604266 540 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AC007742.2-201ENST00000618226 398 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 CR381653.2-201ENST00000624041 768 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms