Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 MTND5P11-201ENST00000511037 1812 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 METTL21EP-201ENST00000298105 713 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 OR11H4-201ENST00000315409 1082 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 SNORA60-201ENST00000362396 134 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 RNA5SP399-201ENST00000364003 117 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 RNU6-304P-201ENST00000364855 107 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 RNA5SP366-201ENST00000365454 123 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 RNU6-609P-201ENST00000365459 107 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 HMGB3P19-201ENST00000403971 560 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 RPL23AP26-201ENST00000412728 464 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 RPS27AP7-201ENST00000422792 455 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 RPL12P34-201ENST00000424532 479 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 ATP5HP2-201ENST00000433885 485 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AP000949.1-201ENST00000438328 629 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 HMGB1P37-201ENST00000439613 609 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 RPS27P5-201ENST00000444247 244 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 RANP8-201ENST00000444720 713 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 RPS17P13-201ENST00000448974 407 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 RPS11P1-201ENST00000451072 473 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 CLIC4P1-201ENST00000453177 535 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 snoU13.1-201ENST00000459157 104 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 RPL38P1-201ENST00000460914 211 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 RN7SL303P-201ENST00000469773 251 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 RN7SL271P-201ENST00000487601 295 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC083829.1-201ENST00000503756 657 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AP002812.4-201ENST00000532139 286 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC079148.1-201ENST00000565944 819 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC110743.1-201ENST00000584870 478 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC008536.1-201ENST00000602872 669 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC123786.2-201ENST00000603459 275 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC243654.2-201ENST00000612843 443 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AL121890.3-201ENST00000618494 516 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 GTF2H2B-203ENST00000508065 1432 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AL356489.2-201ENST00000566968 3528 ntBASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 OR4K17-201ENST00000315543 1032 ntBASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 RNU6-98P-201ENST00000384173 107 ntBASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 MIR192-201ENST00000384915 110 ntBASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 RPL7AP73-201ENST00000413490 353 ntBASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 SEC63P1-201ENST00000425785 1258 ntBASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 IFNNP1-201ENST00000429219 553 ntBASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 AL138878.2-201ENST00000440581 1241 ntBASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 IGBP1P5-201ENST00000507524 1000 ntBASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 OR5AK3P-201ENST00000527486 1297 ntBASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 OR4R2P-201ENST00000530815 597 ntBASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HDHD3Q9BSH5 AL121594.4-201ENST00000556211 1196 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms