Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC092354.1-201ENST00000606057 376 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC098614.4-201ENST00000607601 462 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC118658.2-201ENST00000618697 459 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AP005264.7-201ENST00000625003 745 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC01739-205ENST00000641890 573 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC017007.4-201ENST00000503353 1352 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 MTCO1P18-201ENST00000455518 1419 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC079809.1-201ENST00000415468 276 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 CNOT7P1-201ENST00000429006 852 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 KNOP1P3-201ENST00000446933 426 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 OR9M1P-201ENST00000459641 921 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 RN7SL515P-201ENST00000463999 297 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC116337.2-201ENST00000477662 156 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 RPL7P18-201ENST00000478965 734 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 ARL2BPP6-201ENST00000512757 439 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC046134.1-201ENST00000514454 666 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 snoZ278.1-201ENST00000517059 112 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC013701.1-201ENST00000522657 465 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 OR5AZ1P-201ENST00000527448 943 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 OR5AL2P-201ENST00000532185 920 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 MIR4660-201ENST00000583549 74 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC112220.3-201ENST00000605502 502 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AL121655.1-201ENST00000605811 308 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC112204.3-201ENST00000623822 332 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 SAMMSON-213ENST00000641336 1521 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 MTND4P12-201ENST00000498999 1377 ntBASIC5.42□□□□□ -1.54
CDK5RAP1Q96SZ6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC007382.1-201ENST00000624376 2618 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 RNA5SP223-201ENST00000365174 120 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AL079342.2-201ENST00000403367 482 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AC027644.1-201ENST00000419595 298 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 EI24P4-201ENST00000423683 1078 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 HSPD1P12-201ENST00000429127 1069 ntBASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.41□□□□□ -1.54
CDK5RAP1Q96SZ6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms