Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TXNP6-201ENST00000510190 310 ntBASIC2.87□□□□□ -1.95
AP1S3Q96PC3 OR5H4P-201ENST00000510851 923 ntBASIC2.87□□□□□ -1.95
AP1S3Q96PC3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.87□□□□□ -1.95
AP1S3Q96PC3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.87□□□□□ -1.95
AP1S3Q96PC3 OR7E10P-201ENST00000526420 991 ntBASIC2.87□□□□□ -1.95
AP1S3Q96PC3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.87□□□□□ -1.95
AP1S3Q96PC3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC2.87□□□□□ -1.95
AP1S3Q96PC3 TRAV8-5-201ENST00000537369 341 ntBASIC2.87□□□□□ -1.95
AP1S3Q96PC3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.87□□□□□ -1.95
AP1S3Q96PC3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC2.87□□□□□ -1.95
AP1S3Q96PC3 AL121576.1-201ENST00000556055 276 ntBASIC2.87□□□□□ -1.95
AP1S3Q96PC3 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.87□□□□□ -1.95
AP1S3Q96PC3 CYP2C60P-201ENST00000566088 139 ntBASIC2.87□□□□□ -1.95
AP1S3Q96PC3 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.87□□□□□ -1.95
AP1S3Q96PC3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.87□□□□□ -1.95
AP1S3Q96PC3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
AP1S3Q96PC3 BRDTP1-201ENST00000605735 677 ntBASIC2.87□□□□□ -1.95
AP1S3Q96PC3 MIR8058-201ENST00000615737 89 ntBASIC2.87□□□□□ -1.95
AP1S3Q96PC3 AC048347.1-201ENST00000624621 427 ntBASIC2.87□□□□□ -1.95
AP1S3Q96PC3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
AP1S3Q96PC3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
AP1S3Q96PC3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
AP1S3Q96PC3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.87□□□□□ -1.95
AP1S3Q96PC3 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC007496.3-201ENST00000624987 3443 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 RAD1P1-201ENST00000231383 813 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 HMGB1P10-201ENST00000395823 563 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AL590806.1-201ENST00000415818 853 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC108032.1-201ENST00000416706 207 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 RPL17P36-201ENST00000420302 549 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 RPS29P17-201ENST00000430795 166 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC006466.1-201ENST00000438721 289 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 RPS29P31-201ENST00000446147 164 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 RPS20P32-201ENST00000456044 356 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 RPS27P29-201ENST00000463110 252 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AL132838.2-201ENST00000492041 314 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 RPL7P24-201ENST00000493052 752 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 RPS4XP14-201ENST00000493072 781 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC105233.1-201ENST00000498840 781 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 RN7SKP209-201ENST00000516888 304 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 RN7SKP92-201ENST00000517266 244 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC010198.2-201ENST00000550612 259 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC037471.2-201ENST00000564941 598 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AL592494.3-201ENST00000609485 464 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC019193.2-201ENST00000610012 634 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AL049539.1-201ENST00000611964 459 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 MIR7151-201ENST00000617477 60 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 SNORA50A-202ENST00000629536 136 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 ATE1-AS1-202ENST00000636460 506 ntBASIC2.86□□□□□ -1.95
AP1S3Q96PC3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
AP1S3Q96PC3 AC021755.1-201ENST00000559747 1447 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 OR4K17-201ENST00000315543 1032 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 MIR550A3-201ENST00000390735 95 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 MTHFD2P2-201ENST00000407725 247 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 SETP5-201ENST00000437270 562 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 FTH1P1-201ENST00000437933 532 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 RANP8-201ENST00000444720 713 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 RPS17P13-201ENST00000448974 407 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 RPL21P11-201ENST00000461458 483 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 TSACC-207ENST00000470342 601 ntTSL 2 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 RN7SL860P-201ENST00000473738 223 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 RN7SL826P-201ENST00000479724 288 ntBASIC2.85□□□□□ -1.95
AP1S3Q96PC3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.85□□□□□ -1.95
AP1S3Q96PC3 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms