Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AKAP17BP-201ENST00000431706 2719 ntBASIC7.29□□□□□ -1.24
LRCH3Q96II8 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.29□□□□□ -1.24
LRCH3Q96II8 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.29□□□□□ -1.24
LRCH3Q96II8 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
LRCH3Q96II8 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LRCH3Q96II8 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
LRCH3Q96II8 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
LRCH3Q96II8 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.29□□□□□ -1.24
LRCH3Q96II8 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.29□□□□□ -1.24
LRCH3Q96II8 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.29□□□□□ -1.24
LRCH3Q96II8 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LRCH3Q96II8 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
LRCH3Q96II8 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LRCH3Q96II8 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LRCH3Q96II8 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.29□□□□□ -1.24
LRCH3Q96II8 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LRCH3Q96II8 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
LRCH3Q96II8 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.28□□□□□ -1.24
LRCH3Q96II8 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.28□□□□□ -1.24
LRCH3Q96II8 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.28□□□□□ -1.24
LRCH3Q96II8 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.28□□□□□ -1.24
LRCH3Q96II8 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC7.28□□□□□ -1.24
LRCH3Q96II8 AC089998.1-201ENST00000548575 3141 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.28□□□□□ -1.24
LRCH3Q96II8 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.28□□□□□ -1.24
LRCH3Q96II8 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 Y_RNA.81-201ENST00000362997 102 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 Y_RNA.506-201ENST00000384494 102 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 RNU6-1081P-201ENST00000384537 107 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 EIF4E2P1-201ENST00000393781 255 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 Y_RNA.594-201ENST00000410373 140 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 RPL7AP14-201ENST00000424041 802 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 AC096632.1-201ENST00000427395 310 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC7.28□□□□□ -1.24
LRCH3Q96II8 SNAP23P1-201ENST00000433229 246 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 UBBP5-201ENST00000446970 266 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 NANOGP10-201ENST00000453325 895 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 RPS3AP41-201ENST00000462701 778 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 RPL21P71-201ENST00000465598 459 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 RPS23P3-201ENST00000470993 430 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 AC083906.1-201ENST00000509298 406 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 HIGD1AP13-201ENST00000509878 289 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 SNX18P23-201ENST00000510867 677 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 RNA5SP503-201ENST00000517047 117 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 CYCSP25-201ENST00000525280 316 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 AP005597.2-201ENST00000526238 341 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.28□□□□□ -1.24
LRCH3Q96II8 AL137161.1-201ENST00000532231 390 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC7.28□□□□□ -1.24
LRCH3Q96II8 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
LRCH3Q96II8 AC006557.5-201ENST00000603126 811 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
LRCH3Q96II8 AC130304.1-201ENST00000622942 2385 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.28□□□□□ -1.24
LRCH3Q96II8 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.28□□□□□ -1.24
LRCH3Q96II8 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LRCH3Q96II8 AC138915.4-201ENST00000565549 4147 ntBASIC7.28□□□□□ -1.24
LRCH3Q96II8 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
LRCH3Q96II8 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
LRCH3Q96II8 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 OR55B1P-203ENST00000641518 2602 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
LRCH3Q96II8 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 Y_RNA.39-201ENST00000362620 98 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 SNORA51.9-201ENST00000384295 124 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 E2F6P2-201ENST00000420708 748 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC233981.1-201ENST00000423224 461 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC236972.1-201ENST00000433225 199 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC079922.1-201ENST00000443291 359 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 AL163193.1-201ENST00000444895 788 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.27□□□□□ -1.25
LRCH3Q96II8 PSPC1P2-201ENST00000455130 225 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC021205.1-201ENST00000468797 348 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 GM2AP2-201ENST00000491764 562 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 AL136038.1-201ENST00000497246 351 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 AC022447.4-201ENST00000504053 364 ntBASIC7.27□□□□□ -1.25
LRCH3Q96II8 SNX18P24-201ENST00000505249 671 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms