Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 NDUFB4P12-201ENST00000513465 390 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AP000619.3-201ENST00000535634 1127 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AC005832.3-201ENST00000537929 631 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AC136624.4-201ENST00000573044 370 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 RN7SL802P-201ENST00000577858 299 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 SNORA74C-1-201ENST00000580726 201 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AC017100.2-201ENST00000584628 355 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 DPRXP5-201ENST00000604662 539 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AC097065.2-201ENST00000608159 533 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AL451074.6-201ENST00000608512 729 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AL450489.1-201ENST00000612071 468 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 MLECP1-201ENST00000615893 709 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 MIR6830-201ENST00000636015 70 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HMGB4Q8WW32 AC025574.1-201ENST00000554784 1653 ntBASIC4.83□□□□□ -1.64
HMGB4Q8WW32 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 AC109315.1-201ENST00000584143 1347 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 AC016716.1-201ENST00000265882 708 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 RNU6-157P-201ENST00000383957 107 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 MIR129-1-201ENST00000384972 72 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 PRRC2CP1-201ENST00000404428 159 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 PRELID3BP11-201ENST00000414230 479 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 AL161449.1-201ENST00000414531 1199 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 RPL7P53-201ENST00000421245 739 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 RSL24D1P6-201ENST00000426934 401 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 MTND5P25-201ENST00000430499 799 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 EEF1A1P1-201ENST00000447052 739 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 MTCO2P25-201ENST00000447065 681 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 RPL23AP15-201ENST00000450202 459 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 ANKRD26P4-201ENST00000455755 950 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 AC116353.3-201ENST00000511215 249 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 RNU1-6P-201ENST00000516290 144 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 RNU6-1225P-201ENST00000516336 65 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 AGGF1P6-201ENST00000569213 976 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 AL590392.1-201ENST00000604960 446 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 AL356218.2-201ENST00000605264 187 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 MIR4278-201ENST00000636094 69 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 AC120338.1-201ENST00000625074 1541 ntBASIC4.82□□□□□ -1.64
HMGB4Q8WW32 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB4Q8WW32 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 RSL24D1P4-201ENST00000400938 484 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AL133264.1-201ENST00000407157 562 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 QRSL1P2-201ENST00000418582 964 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 LINC00993-201ENST00000420453 540 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 RPEP3-201ENST00000425462 676 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 RPS17P8-201ENST00000434525 335 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 SETD6P1-201ENST00000444575 317 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 Z99714.1-201ENST00000450463 807 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AC239809.1-201ENST00000450470 217 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGB4Q8WW32 RPS15AP1-201ENST00000457423 391 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 AL133477.1-201ENST00000457472 514 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 NF1P3-201ENST00000457709 450 ntBASIC4.81□□□□□ -1.64
HMGB4Q8WW32 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms