Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC104090.1-201ENST00000506341 1171 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AC117532.1-201ENST00000514638 323 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 SNORA31.9-201ENST00000516429 84 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AC087808.1-201ENST00000520501 361 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AC005832.3-201ENST00000537929 631 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AP003973.1-201ENST00000604639 691 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AC244107.2-201ENST00000611773 76 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AC023158.2-201ENST00000614876 543 ntBASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SMC1BQ8NDV3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 NCLP2-201ENST00000416078 1462 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AL121657.1-201ENST00000327215 531 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 IL6STP1-201ENST00000346911 1020 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 SNORA51.12-201ENST00000384448 134 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 BX323845.1-201ENST00000432417 179 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 SEPT7P5-201ENST00000434048 306 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 MTND2P40-201ENST00000436718 841 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 THAP5P1-201ENST00000439089 262 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 CBX1P4-201ENST00000439415 457 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AL353748.1-201ENST00000440753 474 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 RPS5P7-201ENST00000456664 608 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 DSTNP2-201ENST00000504533 515 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AC021146.8-201ENST00000507455 733 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AC079395.1-201ENST00000510981 262 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AC010587.2-201ENST00000511727 448 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 UBE2NP1-201ENST00000545592 458 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 ISCA1P3-201ENST00000577104 373 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 DPRXP4-201ENST00000578053 568 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 MIR3944-201ENST00000581277 108 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AC069061.3-201ENST00000582254 823 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AL390838.2-201ENST00000602394 274 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 ARF4P1-201ENST00000605447 541 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 OR2AS2P-201ENST00000606902 342 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AP005432.2-201ENST00000608162 586 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AL451049.1-201ENST00000608672 497 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AC018926.3-201ENST00000618841 406 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 ATE1-AS1-202ENST00000636460 506 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AC010300.1-201ENST00000600671 5134 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 AC002525.1-201ENST00000624392 1622 ntBASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.91□□□□□ -1.46
SMC1BQ8NDV3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 MAPK10-328ENST00000641553 4009 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 RNA5SP372-201ENST00000390836 115 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 RN7SKP202-201ENST00000410439 330 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 RNA5SP80-201ENST00000410475 111 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AC114755.2-201ENST00000413520 361 ntBASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.9□□□□□ -1.46
SMC1BQ8NDV3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms