Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC127381.1-201ENST00000555979 939 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 PRELID3BP8-201ENST00000604148 295 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AC087752.4-201ENST00000605911 462 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AC027807.2-201ENST00000616099 408 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AC090527.3-201ENST00000619041 548 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AC140134.1-201ENST00000511830 3544 ntBASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SYNPOQ8N3V7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.59□□□□□ -1.52
SYNPOQ8N3V7 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
SYNPOQ8N3V7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SYNPOQ8N3V7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SYNPOQ8N3V7 AL451142.2-201ENST00000429076 2090 ntBASIC5.59□□□□□ -1.52
SYNPOQ8N3V7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.59□□□□□ -1.52
SYNPOQ8N3V7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
SYNPOQ8N3V7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 RNU6-777P-201ENST00000364265 104 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 RNU1-43P-201ENST00000365052 165 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 DHFRP6-201ENST00000401776 268 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 DUTP5-201ENST00000406790 469 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 RNA5SP487-201ENST00000410186 122 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC004987.3-201ENST00000413879 771 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC093162.1-201ENST00000419682 124 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 OR10T1P-201ENST00000424327 947 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC108161.1-201ENST00000461060 402 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC022880.1-201ENST00000534017 973 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC011447.4-201ENST00000587562 111 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC083760.1-201ENST00000589621 670 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC012065.4-201ENST00000602445 679 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 DEFB131E-202ENST00000602581 683 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 BBIP1P1-201ENST00000602999 279 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 AL590240.3-201ENST00000621416 943 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 SMG1P6-201ENST00000532337 2930 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 LINC00561-201ENST00000565815 2738 ntBASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.58□□□□□ -1.52
SYNPOQ8N3V7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 AL022578.1-201ENST00000439330 1433 ntBASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 SNORA17.1-201ENST00000362945 126 ntBASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 U8.14-201ENST00000390843 143 ntBASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 RPL11P3-201ENST00000395256 523 ntBASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 AC136624.1-201ENST00000400791 413 ntBASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 RPS24P12-201ENST00000402084 394 ntBASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 RPL17P12-201ENST00000413391 526 ntBASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 AL354868.1-201ENST00000417077 482 ntBASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 RPS27AP14-201ENST00000422868 454 ntBASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 AC007161.1-204ENST00000423039 460 ntBASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 SRSF1P1-201ENST00000424058 520 ntBASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 AL035410.1-201ENST00000427409 427 ntBASIC5.57□□□□□ -1.52
SYNPOQ8N3V7 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms