Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 MAPK10-338ENST00000641647 3362 ntBASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM48Q8IWZ4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 SNRPEP3-201ENST00000338402 276 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 RNU6-657P-201ENST00000383904 107 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 RNU6-1151P-201ENST00000384684 107 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 CCNG1P1-201ENST00000406783 885 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 VN1R8P-201ENST00000407739 893 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AC013267.1-201ENST00000458227 267 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 MEMO1P3-201ENST00000459811 302 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 RN7SL583P-201ENST00000475692 287 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 ATP5LP5-201ENST00000483050 299 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AC041039.1-201ENST00000485656 536 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AC008562.1-201ENST00000521763 330 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AC013828.2-201ENST00000532487 235 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AC090502.2-201ENST00000549267 280 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 MIR4489-201ENST00000578869 62 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AP001521.1-201ENST00000609150 300 ntBASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
TRIM48Q8IWZ4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 LINC01963-201ENST00000562038 3148 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AL512646.1-201ENST00000269395 1077 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 SNORA72.1-201ENST00000363485 129 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AL390316.1-201ENST00000406279 553 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AL590002.1-201ENST00000406554 418 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC096921.1-201ENST00000411661 375 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AP000534.2-201ENST00000412729 568 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 RNF10P1-201ENST00000418589 369 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AL158073.1-201ENST00000426848 1104 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 BX276092.6-201ENST00000430476 250 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 OR6D1P-201ENST00000436165 939 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 AC019185.1-201ENST00000442718 389 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 UBE2V1P7-201ENST00000446395 340 ntBASIC5.42□□□□□ -1.54
TRIM48Q8IWZ4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms