Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 OR1L1-202ENST00000373686 1083 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 ANAPC10P1-201ENST00000395991 556 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AL021331.1-201ENST00000402817 582 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 RNU4-22P-201ENST00000411058 166 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AL592310.1-201ENST00000414330 671 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 RPS7P9-201ENST00000414704 586 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC234779.1-201ENST00000425910 285 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 RAC1P8-201ENST00000427086 527 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC073143.1-201ENST00000436316 395 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 ELOCP11-201ENST00000436690 332 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 ELOCP16-201ENST00000444494 332 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 RPL37P3-201ENST00000456825 293 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 SNORA84-201ENST00000459229 133 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC006967.1-201ENST00000467608 589 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 FTH1P24-201ENST00000503502 462 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC020699.1-201ENST00000505161 445 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 MTCO3P15-201ENST00000526563 574 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 MED28P5-201ENST00000528254 438 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC005868.1-201ENST00000536421 331 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AL442163.2-201ENST00000553912 710 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AL121834.1-201ENST00000572284 509 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 NTAN1P1-201ENST00000603150 646 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AL391358.1-201ENST00000605342 190 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC013244.3-201ENST00000605614 388 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC024060.1-201ENST00000607052 494 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 MLECP1-201ENST00000615893 709 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 VN1R7P-201ENST00000619242 903 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC092608.3-201ENST00000625017 386 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 MAPK10-303ENST00000641324 3959 ntBASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.04□□□□□ -1.76
PDLIM3Q53GG5 AL133243.3-201ENST00000617415 3004 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 FAM3C2-201ENST00000312214 681 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 SNORA73.1-201ENST00000363107 205 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 RNU6-236P-201ENST00000363886 106 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 SNORA37-201ENST00000384504 129 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 CHEK2P3-201ENST00000416118 248 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 CHIAP3-201ENST00000423668 1133 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 MTND2P5-201ENST00000432656 1006 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 MTCYBP42-201ENST00000444653 1130 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 Z95327.1-201ENST00000446082 482 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 MTND1P33-201ENST00000446251 917 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 EIF2S2P2-201ENST00000447161 982 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 FTH1P25-201ENST00000447665 469 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 AL359073.1-201ENST00000448036 403 ntBASIC4.03□□□□□ -1.76
PDLIM3Q53GG5 RHEBP2-201ENST00000450289 600 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms