Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 Z92846.1-201ENST00000456203 268 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC108043.1-201ENST00000512696 574 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 SNORD116-26-201ENST00000516006 96 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 HIGD1AP5-201ENST00000529959 259 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 CFL2-206ENST00000556161 546 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC084757.1-201ENST00000559987 490 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AGGF1P8-201ENST00000562979 1000 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC011447.4-201ENST00000587562 111 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AL596327.1-201ENST00000603629 213 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 OR2AS2P-201ENST00000606902 342 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC084782.3-201ENST00000612282 578 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC008083.4-201ENST00000615076 444 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC007494.3-201ENST00000624660 743 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC079228.1-201ENST00000624774 1049 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AC099063.3-201ENST00000642066 185 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 AL731532.2-201ENST00000623542 1953 ntBASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC144BQ3MJ40 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 RNU6-500P-201ENST00000362349 107 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 VDAC2P1-201ENST00000399358 958 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 CYCSP45-201ENST00000402289 315 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 CEACAMP8-201ENST00000413902 580 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 RPL39P6-201ENST00000448289 150 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 AC092754.1-201ENST00000472975 479 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 HSPE1P23-201ENST00000509838 286 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 AC004980.4-201ENST00000513375 203 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 DEFB131D-201ENST00000526803 184 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 OR7K1P-201ENST00000546439 926 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 AC008127.2-201ENST00000549925 1075 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 AC020914.6-201ENST00000594327 272 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 FAM25E-202ENST00000608562 189 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 AC078899.5-201ENST00000612475 178 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 AL353662.3-201ENST00000625131 237 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 DDX43P2-201ENST00000604753 1354 ntBASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC144BQ3MJ40 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AC004817.4-201ENST00000602396 3625 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 MTCO1P14-201ENST00000441695 1559 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AC011155.1-201ENST00000316512 456 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 RN7SKP104-201ENST00000362605 328 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 RNU6-1243P-201ENST00000364028 107 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 RNU6-657P-201ENST00000383904 107 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 MIR105-1-201ENST00000385222 81 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 SNRPEP2-201ENST00000397592 279 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 SSXP10-201ENST00000402595 565 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 AC069218.2-201ENST00000411665 344 ntBASIC6.03□□□□□ -1.44
CCDC144BQ3MJ40 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms