Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AL358794.1-201ENST00000445689 381 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC099063.2-201ENST00000446360 662 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 DNAJC19P8-201ENST00000452887 259 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC005229.2-201ENST00000456995 399 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 RPL6P9-201ENST00000466502 859 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 RPL23AP37-201ENST00000479658 549 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 METTL15P1-201ENST00000481421 1045 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 RN7SL809P-201ENST00000482040 297 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC008837.1-201ENST00000511513 412 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 PRELID3BP4-201ENST00000515476 571 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 NDUFS5P6-201ENST00000529136 295 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 OR8I1P-201ENST00000529291 931 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 LRRC6P1-201ENST00000532188 885 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC079587.1-201ENST00000603846 277 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 PART1_2.1-201ENST00000612397 250 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 ZYXP1-201ENST00000617638 118 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC090506.2-201ENST00000624521 419 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AL121594.5-201ENST00000631724 573 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC140479.6-201ENST00000633535 357 ntBASIC4.73□□□□□ -1.65
USP41Q3LFD5 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP41Q3LFD5 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.73□□□□□ -1.65
USP41Q3LFD5 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP41Q3LFD5 MTND4P31-201ENST00000425607 1343 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP41Q3LFD5 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP41Q3LFD5 RNU1-20P-201ENST00000363314 162 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 RNU6-1339P-201ENST00000363574 91 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 Y_RNA.578-201ENST00000390903 88 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP41Q3LFD5 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 BTF3P8-201ENST00000414577 526 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 AC009302.1-201ENST00000417147 390 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 AC244505.3-201ENST00000454598 187 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
USP41Q3LFD5 RNU7-140P-201ENST00000459546 60 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 AC041039.1-201ENST00000485656 536 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 OR10V3P-201ENST00000525712 725 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 AC084824.1-201ENST00000550917 1005 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 AGGF1P5-201ENST00000567900 919 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 AC067959.1-201ENST00000604334 379 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 AL365400.2-201ENST00000605604 902 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 AL008729.2-201ENST00000606393 473 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 AC009237.17-201ENST00000618111 748 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 MIR6891-201ENST00000618788 93 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 AC104985.3-201ENST00000623479 597 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP41Q3LFD5 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
USP41Q3LFD5 AC139769.1-204ENST00000472297 1931 ntBASIC4.72□□□□□ -1.65
USP41Q3LFD5 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
USP41Q3LFD5 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
USP41Q3LFD5 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.71□□□□□ -1.65
USP41Q3LFD5 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms