Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGN3Q15651 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGN3Q15651 RPL9P32-201ENST00000464118 620 ntBASIC3.12□□□□□ -1.91
HMGN3Q15651 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGN3Q15651 FTH1P21-201ENST00000512179 511 ntBASIC3.12□□□□□ -1.91
HMGN3Q15651 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.12□□□□□ -1.91
HMGN3Q15651 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGN3Q15651 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.12□□□□□ -1.91
HMGN3Q15651 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGN3Q15651 AC006518.1-201ENST00000541449 943 ntBASIC3.12□□□□□ -1.91
HMGN3Q15651 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.12□□□□□ -1.91
HMGN3Q15651 AC011602.1-201ENST00000546484 331 ntBASIC3.12□□□□□ -1.91
HMGN3Q15651 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGN3Q15651 AC006960.3-201ENST00000561845 705 ntBASIC3.12□□□□□ -1.91
HMGN3Q15651 CD24P2-201ENST00000565486 219 ntBASIC3.12□□□□□ -1.91
HMGN3Q15651 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGN3Q15651 AP005901.4-201ENST00000577336 569 ntBASIC3.12□□□□□ -1.91
HMGN3Q15651 AC010680.3-201ENST00000604215 520 ntBASIC3.12□□□□□ -1.91
HMGN3Q15651 AL023583.1-201ENST00000607518 1143 ntBASIC3.12□□□□□ -1.91
HMGN3Q15651 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGN3Q15651 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGN3Q15651 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HMGN3Q15651 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGN3Q15651 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
HMGN3Q15651 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGN3Q15651 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGN3Q15651 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HMGN3Q15651 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGN3Q15651 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMGN3Q15651 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGN3Q15651 AC126755.2-208ENST00000327792 462 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 AC138969.1-213ENST00000331436 462 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 RNU6-283P-201ENST00000364788 107 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 SNORA62-201ENST00000365493 153 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGN3Q15651 RNU6-213P-201ENST00000384051 104 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 RNA5SP293-201ENST00000410527 113 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGN3Q15651 RPA2P2-201ENST00000419698 796 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGN3Q15651 AL158071.1-201ENST00000430315 461 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 AC125238.1-201ENST00000448842 249 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGN3Q15651 MRPS31P2-201ENST00000451581 518 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 IFNWP4-201ENST00000453148 294 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.11□□□□□ -1.91
HMGN3Q15651 AC099563.1-201ENST00000456086 418 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HMGN3Q15651 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 AC022695.1-201ENST00000522089 237 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMGN3Q15651 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGN3Q15651 UBE2NP1-201ENST00000545592 458 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGN3Q15651 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGN3Q15651 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGN3Q15651 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGN3Q15651 KLKP1-201ENST00000595979 403 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 AL163642.2-201ENST00000604722 1019 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGN3Q15651 MIR6830-201ENST00000636015 70 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGN3Q15651 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGN3Q15651 CASC19-284ENST00000642142 1868 ntBASIC3.11□□□□□ -1.91
HMGN3Q15651 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGN3Q15651 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMGN3Q15651 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGN3Q15651 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGN3Q15651 MTND5P27-201ENST00000428871 1720 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGN3Q15651 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGN3Q15651 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HMGN3Q15651 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HMGN3Q15651 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.1□□□□□ -1.91
HMGN3Q15651 RNU1-13P-201ENST00000384499 162 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 PTMAP5-201ENST00000393073 333 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 AL136116.1-201ENST00000403591 381 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HMGN3Q15651 AL807761.1-201ENST00000417622 171 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 HMGB3P20-201ENST00000417997 600 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGN3Q15651 OSTCP5-201ENST00000425293 453 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 FAR2P4-202ENST00000425399 584 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGN3Q15651 B3GNT2P1-201ENST00000434960 952 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 SETD6P1-201ENST00000444575 317 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 AC006326.1-201ENST00000445465 787 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 AC114755.5-201ENST00000447760 831 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGN3Q15651 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGN3Q15651 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGN3Q15651 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGN3Q15651 SEPT7P6-201ENST00000469999 1143 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 RN7SL442P-201ENST00000473804 320 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 AC026979.1-201ENST00000492525 396 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 TPT1P3-201ENST00000492841 512 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGN3Q15651 TRAV31-201ENST00000502780 342 ntBASIC3.1□□□□□ -1.91
HMGN3Q15651 AC021146.5-201ENST00000503544 545 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms