Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 CHEK2P3-201ENST00000416118 248 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.41□□□□□ -1.7
LTBQ06643 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.41□□□□□ -1.7
LTBQ06643 AC004074.1-201ENST00000421810 1063 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC092162.1-201ENST00000432828 434 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AL353706.1-201ENST00000436728 494 ntBASIC4.41□□□□□ -1.7
LTBQ06643 MTND4P6-201ENST00000438297 472 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AL137845.2-201ENST00000444292 988 ntBASIC4.41□□□□□ -1.7
LTBQ06643 CDC27P1-201ENST00000445384 715 ntBASIC4.41□□□□□ -1.7
LTBQ06643 RHEBP2-201ENST00000450289 600 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.41□□□□□ -1.7
LTBQ06643 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.41□□□□□ -1.7
LTBQ06643 CYCSP34-201ENST00000458172 304 ntBASIC4.41□□□□□ -1.7
LTBQ06643 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.41□□□□□ -1.7
LTBQ06643 RPL23AP56-201ENST00000460778 453 ntBASIC4.41□□□□□ -1.7
LTBQ06643 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LTBQ06643 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
LTBQ06643 RN7SL319P-201ENST00000480656 221 ntBASIC4.41□□□□□ -1.7
LTBQ06643 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.41□□□□□ -1.7
LTBQ06643 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.41□□□□□ -1.7
LTBQ06643 AC113347.3-201ENST00000509113 148 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC108120.2-201ENST00000512973 294 ntBASIC4.41□□□□□ -1.7
LTBQ06643 snoZ278.1-201ENST00000517059 112 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.41□□□□□ -1.7
LTBQ06643 RPL12P22-201ENST00000519073 490 ntBASIC4.41□□□□□ -1.7
LTBQ06643 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LTBQ06643 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.41□□□□□ -1.7
LTBQ06643 MTCYBP20-201ENST00000524239 1129 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.41□□□□□ -1.7
LTBQ06643 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.41□□□□□ -1.7
LTBQ06643 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LTBQ06643 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
LTBQ06643 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.41□□□□□ -1.7
LTBQ06643 AC007115.1-201ENST00000546853 234 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC010198.2-201ENST00000550612 259 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.41□□□□□ -1.7
LTBQ06643 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.41□□□□□ -1.7
LTBQ06643 AL049870.4-201ENST00000555741 486 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.41□□□□□ -1.7
LTBQ06643 AC087465.1-201ENST00000560574 245 ntBASIC4.41□□□□□ -1.7
LTBQ06643 UBE2FP2-201ENST00000566646 462 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.41□□□□□ -1.7
LTBQ06643 AP005262.1-201ENST00000582646 997 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.41□□□□□ -1.7
LTBQ06643 DEFB131E-202ENST00000602581 683 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC021749.1-201ENST00000604322 607 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AL163642.2-201ENST00000604722 1019 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC064872.1-201ENST00000604823 1072 ntBASIC4.41□□□□□ -1.7
LTBQ06643 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC019131.2-201ENST00000609071 870 ntBASIC4.41□□□□□ -1.7
LTBQ06643 VN1R7P-201ENST00000619242 903 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AL359757.1-201ENST00000623176 255 ntBASIC4.41□□□□□ -1.7
LTBQ06643 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.41□□□□□ -1.7
LTBQ06643 AC068724.3-201ENST00000625906 87 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC084035.1-201ENST00000634543 607 ntBASIC4.41□□□□□ -1.7
LTBQ06643 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.41□□□□□ -1.7
LTBQ06643 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LTBQ06643 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.41□□□□□ -1.7
LTBQ06643 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LTBQ06643 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.41□□□□□ -1.7
LTBQ06643 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LTBQ06643 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LTBQ06643 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LTBQ06643 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.41□□□□□ -1.7
LTBQ06643 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
LTBQ06643 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.41□□□□□ -1.7
LTBQ06643 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LTBQ06643 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
LTBQ06643 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.4□□□□□ -1.7
LTBQ06643 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.4□□□□□ -1.7
LTBQ06643 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LTBQ06643 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LTBQ06643 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.4□□□□□ -1.7
LTBQ06643 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LTBQ06643 LINC01355-201ENST00000566551 5444 ntBASIC4.4□□□□□ -1.7
LTBQ06643 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
LTBQ06643 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LTBQ06643 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LTBQ06643 FAM3C2-201ENST00000312214 681 ntBASIC4.4□□□□□ -1.71
LTBQ06643 Y_RNA.77-201ENST00000362962 107 ntBASIC4.4□□□□□ -1.71
LTBQ06643 snoZ40.1-201ENST00000364540 72 ntBASIC4.4□□□□□ -1.71
LTBQ06643 RNU4-75P-201ENST00000364621 146 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.4□□□□□ -1.71
LTBQ06643 RPS3AP26-201ENST00000398259 784 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AL121978.1-201ENST00000402778 359 ntBASIC4.4□□□□□ -1.71
LTBQ06643 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.71
LTBQ06643 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBQ06643 MTCO1P21-201ENST00000416634 589 ntBASIC4.4□□□□□ -1.71
LTBQ06643 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBQ06643 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBQ06643 EIF4HP2-201ENST00000424380 563 ntBASIC4.4□□□□□ -1.71
LTBQ06643 RPS3AP44-201ENST00000425466 790 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBQ06643 AC004975.1-201ENST00000428733 208 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBQ06643 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBQ06643 AC098826.1-201ENST00000433943 471 ntBASIC4.4□□□□□ -1.71
LTBQ06643 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.4□□□□□ -1.71
LTBQ06643 AC093716.1-201ENST00000435923 377 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms