Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
YBX1P67809 RNU6-532P-201ENST00000384318 107 ntBASIC5.52□□□□□ -1.53
YBX1P67809 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
YBX1P67809 RNA5SP498-201ENST00000411342 120 ntBASIC5.52□□□□□ -1.53
YBX1P67809 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.52□□□□□ -1.53
YBX1P67809 AC083875.1-201ENST00000419509 405 ntBASIC5.52□□□□□ -1.53
YBX1P67809 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.52□□□□□ -1.53
YBX1P67809 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.52□□□□□ -1.53
YBX1P67809 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.52□□□□□ -1.53
YBX1P67809 AC138761.5-201ENST00000433967 325 ntBASIC5.52□□□□□ -1.53
YBX1P67809 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.52□□□□□ -1.53
YBX1P67809 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.52□□□□□ -1.53
YBX1P67809 RPL31P15-201ENST00000449770 338 ntBASIC5.52□□□□□ -1.53
YBX1P67809 AL590365.1-201ENST00000450788 243 ntBASIC5.52□□□□□ -1.53
YBX1P67809 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.52□□□□□ -1.53
YBX1P67809 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.52□□□□□ -1.53
YBX1P67809 SBDSP1-204ENST00000453858 737 ntBASIC5.52□□□□□ -1.53
YBX1P67809 RNU1-88P-201ENST00000459274 128 ntBASIC5.52□□□□□ -1.53
YBX1P67809 AC021205.1-201ENST00000468797 348 ntBASIC5.52□□□□□ -1.53
YBX1P67809 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.52□□□□□ -1.53
YBX1P67809 AC111000.3-201ENST00000508057 576 ntBASIC5.52□□□□□ -1.53
YBX1P67809 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
YBX1P67809 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
YBX1P67809 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.52□□□□□ -1.53
YBX1P67809 AC108064.1-201ENST00000513791 460 ntBASIC5.52□□□□□ -1.53
YBX1P67809 Y_RNA.693-201ENST00000516641 110 ntBASIC5.52□□□□□ -1.53
YBX1P67809 AC138832.1-201ENST00000522871 556 ntBASIC5.52□□□□□ -1.53
YBX1P67809 MRPS16P1-201ENST00000523462 412 ntBASIC5.52□□□□□ -1.53
YBX1P67809 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.52□□□□□ -1.53
YBX1P67809 SLC2A13P1-201ENST00000531560 322 ntBASIC5.52□□□□□ -1.53
YBX1P67809 AC027544.3-201ENST00000535082 757 ntBASIC5.52□□□□□ -1.53
YBX1P67809 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.52□□□□□ -1.53
YBX1P67809 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.52□□□□□ -1.53
YBX1P67809 TRAV15-201ENST00000556680 249 ntBASIC5.52□□□□□ -1.53
YBX1P67809 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.52□□□□□ -1.53
YBX1P67809 MIR548Y-201ENST00000582739 110 ntBASIC5.52□□□□□ -1.53
YBX1P67809 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.52□□□□□ -1.53
YBX1P67809 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.52□□□□□ -1.53
YBX1P67809 AL050343.2-201ENST00000607338 280 ntBASIC5.52□□□□□ -1.53
YBX1P67809 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
YBX1P67809 MIR6826-201ENST00000617808 98 ntBASIC5.52□□□□□ -1.53
YBX1P67809 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
YBX1P67809 AC002550.2-201ENST00000621246 394 ntBASIC5.52□□□□□ -1.53
YBX1P67809 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.52□□□□□ -1.53
YBX1P67809 MIR193BHG-214ENST00000641765 509 ntBASIC5.52□□□□□ -1.53
YBX1P67809 SAMMSON-227ENST00000642114 1199 ntBASIC5.52□□□□□ -1.53
YBX1P67809 AL034546.1-201ENST00000623740 3693 ntBASIC5.52□□□□□ -1.53
YBX1P67809 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.52□□□□□ -1.53
YBX1P67809 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.52□□□□□ -1.53
YBX1P67809 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
YBX1P67809 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
YBX1P67809 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
YBX1P67809 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
YBX1P67809 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
YBX1P67809 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
YBX1P67809 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.52□□□□□ -1.53
YBX1P67809 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
YBX1P67809 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
YBX1P67809 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
YBX1P67809 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
YBX1P67809 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
YBX1P67809 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.51□□□□□ -1.53
YBX1P67809 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
YBX1P67809 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
YBX1P67809 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
YBX1P67809 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.51□□□□□ -1.53
YBX1P67809 CCT8P1-201ENST00000413611 1657 ntBASIC5.51□□□□□ -1.53
YBX1P67809 AL645937.1-201ENST00000641739 1652 ntBASIC5.51□□□□□ -1.53
YBX1P67809 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
YBX1P67809 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
YBX1P67809 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.51□□□□□ -1.53
YBX1P67809 RNY4P34-201ENST00000364779 95 ntBASIC5.51□□□□□ -1.53
YBX1P67809 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
YBX1P67809 RNU6-1122P-201ENST00000384449 107 ntBASIC5.51□□□□□ -1.53
YBX1P67809 RNA5SP284-201ENST00000384547 118 ntBASIC5.51□□□□□ -1.53
YBX1P67809 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
YBX1P67809 RNU6-332P-201ENST00000391193 108 ntBASIC5.51□□□□□ -1.53
YBX1P67809 MIR937-201ENST00000401271 86 ntBASIC5.51□□□□□ -1.53
YBX1P67809 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.51□□□□□ -1.53
YBX1P67809 AL354766.1-201ENST00000423396 542 ntBASIC5.51□□□□□ -1.53
YBX1P67809 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
YBX1P67809 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.51□□□□□ -1.53
YBX1P67809 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.51□□□□□ -1.53
YBX1P67809 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.51□□□□□ -1.53
YBX1P67809 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.51□□□□□ -1.53
YBX1P67809 PGBD4P3-201ENST00000440731 581 ntBASIC5.51□□□□□ -1.53
YBX1P67809 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.51□□□□□ -1.53
YBX1P67809 OR7E116P-201ENST00000448529 957 ntBASIC5.51□□□□□ -1.53
YBX1P67809 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.51□□□□□ -1.53
YBX1P67809 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.51□□□□□ -1.53
YBX1P67809 RPL18AP17-201ENST00000455326 198 ntBASIC5.51□□□□□ -1.53
YBX1P67809 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.51□□□□□ -1.53
YBX1P67809 AC087312.1-201ENST00000471411 480 ntBASIC5.51□□□□□ -1.53
YBX1P67809 RPSAP51-201ENST00000497462 645 ntBASIC5.51□□□□□ -1.53
YBX1P67809 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.51□□□□□ -1.53
YBX1P67809 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.51□□□□□ -1.53
YBX1P67809 RNU6-1261P-201ENST00000517194 104 ntBASIC5.51□□□□□ -1.53
YBX1P67809 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.51□□□□□ -1.53
YBX1P67809 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.51□□□□□ -1.53
YBX1P67809 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms