Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.36□□□□□ -1.71
PEX3P56589 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PEX3P56589 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.36□□□□□ -1.71
PEX3P56589 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PEX3P56589 AP002001.2-201ENST00000529025 1469 ntBASIC4.36□□□□□ -1.71
PEX3P56589 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PEX3P56589 RLIMP2-201ENST00000427891 1563 ntBASIC4.36□□□□□ -1.71
PEX3P56589 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PEX3P56589 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.35□□□□□ -1.71
PEX3P56589 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PEX3P56589 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PEX3P56589 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.35□□□□□ -1.71
PEX3P56589 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PEX3P56589 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PEX3P56589 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PEX3P56589 RNU6-792P-201ENST00000363490 107 ntBASIC4.35□□□□□ -1.71
PEX3P56589 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PEX3P56589 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.35□□□□□ -1.71
PEX3P56589 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
PEX3P56589 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.35□□□□□ -1.71
PEX3P56589 RNU6-178P-201ENST00000384631 104 ntBASIC4.35□□□□□ -1.71
PEX3P56589 AL356967.1-201ENST00000406305 431 ntBASIC4.35□□□□□ -1.71
PEX3P56589 RNA5SP39-201ENST00000411245 120 ntBASIC4.35□□□□□ -1.71
PEX3P56589 RNU4-74P-201ENST00000411280 161 ntBASIC4.35□□□□□ -1.71
PEX3P56589 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.35□□□□□ -1.71
PEX3P56589 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PEX3P56589 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.35□□□□□ -1.71
PEX3P56589 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.35□□□□□ -1.71
PEX3P56589 AP000936.3-201ENST00000438127 255 ntBASIC4.35□□□□□ -1.71
PEX3P56589 ELOCP8-201ENST00000439309 332 ntBASIC4.35□□□□□ -1.71
PEX3P56589 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.35□□□□□ -1.71
PEX3P56589 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.35□□□□□ -1.71
PEX3P56589 ELOCP15-201ENST00000442090 332 ntBASIC4.35□□□□□ -1.71
PEX3P56589 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.35□□□□□ -1.71
PEX3P56589 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.35□□□□□ -1.71
PEX3P56589 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.35□□□□□ -1.71
PEX3P56589 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.35□□□□□ -1.71
PEX3P56589 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.35□□□□□ -1.71
PEX3P56589 RPL31P61-201ENST00000496160 376 ntBASIC4.35□□□□□ -1.71
PEX3P56589 AC010468.3-201ENST00000508225 458 ntBASIC4.35□□□□□ -1.71
PEX3P56589 AC026402.1-201ENST00000513642 170 ntBASIC4.35□□□□□ -1.71
PEX3P56589 NDUFA5P2-201ENST00000519723 344 ntBASIC4.35□□□□□ -1.71
PEX3P56589 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.35□□□□□ -1.71
PEX3P56589 HAUS1P3-201ENST00000523909 662 ntBASIC4.35□□□□□ -1.71
PEX3P56589 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.35□□□□□ -1.71
PEX3P56589 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.35□□□□□ -1.71
PEX3P56589 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.35□□□□□ -1.71
PEX3P56589 RN7SL703P-201ENST00000578485 302 ntBASIC4.35□□□□□ -1.71
PEX3P56589 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.35□□□□□ -1.71
PEX3P56589 AC005776.1-201ENST00000603164 290 ntBASIC4.35□□□□□ -1.71
PEX3P56589 AC015849.2-201ENST00000605738 409 ntBASIC4.35□□□□□ -1.71
PEX3P56589 AC099676.1-201ENST00000608886 657 ntBASIC4.35□□□□□ -1.71
PEX3P56589 AL096803.3-201ENST00000609032 532 ntBASIC4.35□□□□□ -1.71
PEX3P56589 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PEX3P56589 AL591424.2-201ENST00000617023 128 ntBASIC4.35□□□□□ -1.71
PEX3P56589 AL109620.1-201ENST00000618738 1197 ntBASIC4.35□□□□□ -1.71
PEX3P56589 AL163051.2-201ENST00000618976 735 ntBASIC4.35□□□□□ -1.71
PEX3P56589 AC090617.9-201ENST00000623751 147 ntBASIC4.35□□□□□ -1.71
PEX3P56589 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PEX3P56589 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PEX3P56589 MAPK10-253ENST00000641010 4072 ntBASIC4.35□□□□□ -1.71
PEX3P56589 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.35□□□□□ -1.71
PEX3P56589 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PEX3P56589 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PEX3P56589 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PEX3P56589 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PEX3P56589 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PEX3P56589 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PEX3P56589 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PEX3P56589 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PEX3P56589 RN7SKP280-201ENST00000364196 304 ntBASIC4.34□□□□□ -1.71
PEX3P56589 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PEX3P56589 RNU6-213P-201ENST00000384051 104 ntBASIC4.34□□□□□ -1.71
PEX3P56589 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.34□□□□□ -1.71
PEX3P56589 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.34□□□□□ -1.71
PEX3P56589 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.34□□□□□ -1.71
PEX3P56589 Z97055.1-201ENST00000419730 712 ntBASIC4.34□□□□□ -1.71
PEX3P56589 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PEX3P56589 BX119904.1-201ENST00000432026 348 ntBASIC4.34□□□□□ -1.71
PEX3P56589 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.34□□□□□ -1.71
PEX3P56589 AC083863.1-201ENST00000438811 231 ntBASIC4.34□□□□□ -1.71
PEX3P56589 RPS29P7-201ENST00000439662 171 ntBASIC4.34□□□□□ -1.71
PEX3P56589 AL353748.1-201ENST00000440753 474 ntBASIC4.34□□□□□ -1.71
PEX3P56589 RANP8-201ENST00000444720 713 ntBASIC4.34□□□□□ -1.71
PEX3P56589 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.34□□□□□ -1.71
PEX3P56589 HMGB1P5-202ENST00000451497 985 ntBASIC4.34□□□□□ -1.71
PEX3P56589 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
PEX3P56589 RN7SL809P-201ENST00000482040 297 ntBASIC4.34□□□□□ -1.71
PEX3P56589 RPS3AP6-201ENST00000484430 795 ntBASIC4.34□□□□□ -1.71
PEX3P56589 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PEX3P56589 AC087369.1-201ENST00000520775 996 ntBASIC4.34□□□□□ -1.71
PEX3P56589 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.34□□□□□ -1.71
PEX3P56589 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.34□□□□□ -1.71
PEX3P56589 AC093014.1-201ENST00000548926 724 ntBASIC4.34□□□□□ -1.71
PEX3P56589 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.34□□□□□ -1.71
PEX3P56589 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.34□□□□□ -1.71
PEX3P56589 AC090312.1-201ENST00000580637 348 ntBASIC4.34□□□□□ -1.71
PEX3P56589 CBX3P2-202ENST00000583365 535 ntBASIC4.34□□□□□ -1.71
PEX3P56589 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.34□□□□□ -1.71
PEX3P56589 AC022916.3-201ENST00000592961 742 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms